Leisingera methylohalidivorans: METH_20215
Help
Entry
METH_20215 CDS
T02961
Name
(GenBank) helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_20215
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METH_20215
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
METH_20215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHD02649
UniProt:
V9VY35
LinkDB
All DBs
Position
complement(3981060..3984413)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTIRDAASEAQFRAARPDASTWLAANAGSGKTKVLTDRVARLLLKGVQPQHILCLTYTKA
AASEMQNRLFKRLGEWAMLGDPVLITALTELGELSTGPNDLAQARTLFARAIETPGGLKI
QTIHSFCSSLLRRFPLEAGVSPQFSEMDDRAGQMLRAEIMEDFAQGTEAPLVEALARHVS
DSDFETLTAAVCQRRADFSRPLEWNSLLDLFELPPDFDETALEALVFLGGEEELLQRTRD
MLGQGGSTDQKAADKLAGITKPTRADLGTLENVFLTGPGAKEPFTAKLDKFPTKKLRESH
LSLMDQLEPLMRRVEDARTKRIALTAARKSHDLHRFAAAFLPEYERRKQLRGWLDFDDLI
LKARQLLNDPGVAAWVLYRLDGGIDHILVDEAQDTSPVQWDVIEKLAQEFTAGEGARSDV
ERTIFVVGDKKQSIYSFQGADPDAFDRMQLEFGNRLSETGAGLQDASLDFSFRSSAAILK
LVDLVFRDSPRAGFRKDALHRAFKSDLPGRVDLWPVVGKVEDDEDPDWTSPVDRPSSRHH
TVILAERIAQSIKGMIETGTTIPEDGSERGTFQRRPVQAGDFLILVQRRSDLFSEIIRAC
KKAELPIAGADRLKVGAELAVKDIAALLRFLALPEDSLSLAEALKSPLFGWSEQALFDLA
HRREAMYLWPALRDRAGAFPETMAVLNDLRANADFLRPYDLIERILTRHGGRQKLLGRLG
PEAEDGVNALLSQALAYERTDVPSLTGFLVWMQTDDLEIKRQMGAAGNMIRVMSVHGSKG
LEAPIVILPDTAKRQAPRDAEIMLADGTPVWKLPKDQMPAAMLSAREAAQEKLQNERLRL
LYVALTRAEKWLIVAAAGDVGEMNDSWYRMAERALRDGGAVELDIEGGTGLRLQHGDWDG
LPLVEKPGQSVEKHILPEVFTRPAGPYAAPAPALSPSDLGGPKALPGDQGLDEEAAKARG
SRLHLLLEHLPGRPQEEWPLLAQNLLLNANDSAELLVEASGVLQNAALSHIFQTDTLAEV
PVTADLYGSRLHGIIDRLVVTPEKVLAVDFKSNVTVPETPQQCPEGLLRQMGAYAHALAQ
IYPDRAIETALLWTRNATLMPLPQKLVAKALQRRMEP
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgtgatgccgcctccgaggcgcaattccgtgccgcccggcctgatgcctct
acatggctggccgccaatgccgggtcaggcaagaccaaagtgctgactgaccgggttgcg
cggctgttgctgaaaggcgtgcagccgcagcacatcctgtgcctgacctacaccaaggcc
gccgccagcgagatgcagaaccggctgttcaagcggctgggcgaatgggcgatgctggga
gatccagtgctgatcactgccttgaccgaactgggagagctcagcaccggacccaacgac
ctggctcaggccagaaccctgtttgcccgcgcgattgaaacgccgggcgggttgaaaatc
cagaccattcactccttctgttcgtcgctgctgcgccgtttcccgctggaggccggcgtc
agcccgcagttttccgaaatggatgaccgcgcaggccagatgctgcgcgctgaaatcatg
gaagactttgcccaaggcaccgaggcaccgcttgtggaggccttggcacgccatgtcagc
gacagcgatttcgaaaccctgacagcagccgtgtgtcagcgccgcgccgatttctccagg
ccgctggaatggaacagcttactggacctgtttgagctcccgccagattttgatgaaacc
gcgctggaagccctggtgtttttgggcggcgaggaagagctgctgcagcgcacccgcgat
atgctcgggcagggcggcagcaccgatcagaaagccgcggataagctcgccggcatcacc
aaacccacacgcgccgaccttggcacactggagaacgttttcctgactggtcccggggcc
aaggaaccttttacggcgaaactggacaagttcccaaccaaaaagctgcgcgaatcgcat
ctttcgctgatggatcagctggagccgctgatgcggcgggtcgaggatgcgcgcaccaag
cgcatcgccctaaccgctgcccggaaaagccacgatctgcaccgttttgctgccgccttc
ctgcccgagtatgagcgccgcaagcagttgcgcggctggctcgatttcgacgacctgatc
ctgaaggcccggcaactgctgaatgatcccggcgttgcggcctgggtgctgtaccggctg
gacggcggcatcgaccacatcctggtggacgaagcgcaggataccagcccggtgcaatgg
gacgtgatcgagaagctggcgcaggaattcactgccggcgagggcgcgcgctcggatgtc
gaacgcacgatattcgtggtcggcgacaagaagcagtcgatctattccttccaaggcgcc
gatccggatgcctttgaccggatgcagctggaattcgggaacaggctgtcggaaaccggg
gcaggactgcaagatgcctcgctcgatttctccttccgctcctctgccgcgatcctgaaa
ctggtggacttggtgttccgcgacagcccccgcgctggttttcgaaaagacgcgctgcac
cgcgctttcaagtccgatctgccgggccgggtagacctttggccggtggtcgggaaggtc
gaggatgacgaggatcccgattggaccagccccgtcgaccggcccagcagccggcatcac
acagtgatcctggccgaacgcattgcccaatcgatcaagggaatgatcgagaccggcacc
accatcccagaggacggctctgagcgcggcaccttccagcgccgcccggtgcaggccggt
gatttcctgatcctggtgcagcgccggtccgatctgttctcggagatcatacgtgcctgc
aaaaaggcagaactgccgatcgccggcgccgaccgcctgaaggtgggcgccgaactggcg
gtcaaggacatcgcagcactgttgcggttcctggccttgccggaagactctttgtcactg
gcggaggctctgaaatcaccactgttcggctggagcgagcaagcgctgttcgatctggcg
caccggcgggaggcgatgtacctgtggccggcattgcgcgaccgggcaggggcgtttccc
gaaaccatggccgtgctgaatgatctgcgcgccaatgccgacttcctgcgcccctatgac
ctgattgagcgcattctgacccgtcacggcggccgtcagaaactgctgggcaggctggga
ccggaagctgaggacggtgtcaacgcgctgctgtcgcaggcactggcctatgaacgcact
gatgtgcccagcctcaccgggtttctggtctggatgcagaccgatgatctggagatcaaa
cgccagatgggtgcagcaggcaatatgatccgggtgatgtcggtgcatggctcgaaaggt
ctggaggccccgatcgtgatccttccggacaccgccaagcgccaggcgccgcgcgatgcc
gaaatcatgctggcagatggcactccggtctggaaactgcccaaggaccagatgccagcc
gcgatgctgtctgcccgagaagccgcgcaggagaaactgcaaaatgaacggctgcgcctt
ttgtatgtggctctaacccgagcggaaaaatggttaatcgtcgccgcagccggcgacgtc
ggtgagatgaacgacagctggtaccgtatggcggaacgcgccttgcgggacggcggggcg
gtggagcttgatatcgaaggcggcaccggtcttcgcctgcagcacggtgattgggacggg
cttcctctggttgaaaagcctggtcaaagcgttgagaaacacattctgccggaggtgttt
acccgtccggcaggaccttatgctgcgccggcgccggcgctcagcccatcggatctgggc
ggacccaaggccttgccaggggatcagggtctggacgaggaggcggccaaggcgcgcggc
tcccggctgcacctgctgttggagcatctgcccggccgcccccaggaggaatggccccta
ttggctcaaaatctattgctgaatgcaaatgacagcgcggagctgctggttgaggcctcg
ggcgtacttcagaacgctgccctctctcatattttccagacagacacattggcggaggtc
cccgttaccgctgatttgtacggatcgcgcttgcatggcatcatagaccggctggttgta
acaccggaaaaagtcctggcggtggattttaaatccaacgtgactgtacccgaaacaccc
cagcaatgcccggaaggcctgctgcggcagatgggggcctatgcccatgcgctggcacag
atttatccggaccgcgccatcgaaaccgcattgctttggacccgcaatgccaccctaatg
ccgctgccgcaaaagcttgtggcaaaggcactgcagcgtcggatggaaccttga
DBGET
integrated database retrieval system
