Leisingera methylohalidivorans: METH_20220
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Entry
METH_20220 CDS
T02961
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_20220
Enzymes [BR:
lmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
METH_20220
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
METH_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AHD02650
UniProt:
V9VZ45
LinkDB
All DBs
Position
complement(3984410..3987343)
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AA seq
977 aa
AA seq
DB search
MMFEPTSKPRVFALPCGVDFPRALTDGMRVRSQNQPPEALARAELIVNTSRMARRVRTLF
DTGPAMLLPRMLLLTDLAQRATLDGLPPALPPLRRRLELSQLIAKLLDAQPDLASRASLY
DLSDSLAALIDEMQGEGVSTDAIRDLDVSDMSGHWARAQAFIGIADQFTGLHEGAIDSQA
RQRQVVLNLIDQWQENPPQHPVILAGSTGSRGTTLMLMQAIARLPQGAVVLPGFDFDQPE
IVWAGLDDPMISEDHPQYRFHRLLKDLELSPSDVQCWTETQPAAPARNRLVSLALRPAPV
TDAWMSEGPHLTGLDTATENVTLVEAPTPRAEALAIALRLRQAAEDGQTAALITPDRMLT
RQVSAALDRWEILPDDSAGQPLQLSPPGRFLRHVAGLFCKPLACDSLLTLLKHPLTHDGA
DRGSHLRQTRELELSLRRNGPPFPDAAAFAGFENGRELTPGWVEWLTACFADKEITGTLP
LVDWVQRLRELAQHIAAGSQADGSGTLWDKKAGQAALACIENLEAESPYGGDMSARDFAD
LLGALLSQGEVRDRDAPYGSIMIWGTLEARVQGADLVILGGLNEGSWPEAASPDPWLNRQ
LRNQAGLLLPERRIGLSAHDFQQAIAAPEVWLTRAERSEEADTVPSRWLNRLTNLLSGLP
DQGGREALDAMRAKGRQWLGWADALEEPAPAPQMPRPSPRPPVSARPRRLTITEIPRLIR
DPYAIYAKHVLRLKPLTPLVQEPDALLRGIVVHEVFERFIKESQTDPSLLTAGHLIDKTR
ELLESHVPWPVARILWHSRIRRIASDFVLAEQERQSRAKPVAFEAKGSARLEPLDFTIAC
RADRIDMDDRGFLHLYDYKTGAPPSEAQQKKFEKQLLIEAAMAEQGAFDGLGPAEVARAL
FIGLGSSMKEVRAPLEAEPPAKIWDELHTLIGAYFEPEQGYSSRRMVYRDDIAGDYDHLA
RYGEWDRSATPQPEDLS
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgaacctacttccaaaccgcgcgtcttcgctcttccctgtggtgtcgacttc
ccgcgtgctctgaccgatgggatgcgcgtccgcagtcagaaccagccgcccgaggcgctg
gcgagggctgaactgatcgtcaacacctcccgtatggcgcggcgtgtccgcaccctgttt
gacactggccccgccatgctgctgccgcgtatgctgttgctgaccgatctggcacagcgc
gccacgctggacgggctgccgcccgctttgcccccgctgcggcggcggctggaattatca
cagctgatcgcaaaactattggatgcacagcccgatctcgcctccagggcgtcgctgtat
gacttgtccgacagcctggccgcgctgattgacgagatgcagggcgaaggtgtcagcacc
gatgcgatccgcgatctggatgtttccgacatgtccggtcactgggcccgcgcgcaggcc
tttatcgggatcgccgaccagttcaccggtctgcacgagggtgcaatagattcccaggcg
cggcagcggcaggtggtgctgaacctcatagaccaatggcaggagaacccaccgcagcat
ccagtgatcctggccggctccaccggctcgcgcgggacaacgctgatgctgatgcaggcc
atcgcccggctgccgcaaggcgcggtggtgctgcccggcttcgattttgatcagcctgaa
atcgtctgggccgggctggatgatccgatgatctcggaagatcacccgcaataccggttc
cacaggctgctgaaggatctcgagctctcacccagcgatgttcagtgctggacggagacc
cagcccgcagcccccgcccgtaaccggttggtgtcgttggccctgcgccctgccccggta
accgatgcctggatgagcgaaggcccgcatctgacaggtttggacacagccacggaaaac
gtgaccctggtcgaggcccccaccccccgcgccgaagcgctcgccattgcactgcgtctg
cgccaggccgcagaggacgggcagaccgccgcgctgatcaccccggaccggatgctgacc
cgccaggtctcagctgctctggaccgctgggagatcctgccggacgattccgccggccag
cccttgcagctgtcacctccgggccgcttcctgcgccatgtggcagggctgttctgcaaa
ccgctggcctgcgacagtctgctgacgctgctgaagcacccgctgacccacgatggtgcg
gaccgcggcagccaccttcgccagacccgcgagctggagctttccctgcgccgcaacggc
ccgccgttcccagatgctgcagcctttgcagggtttgaaaacggccgggagctgacaccc
gggtgggtggaatggctgaccgcctgtttcgcggataaggaaatcaccggcaccctgcct
ttggtagactgggttcagcgcctgcgggaactggcccaacacatcgctgcaggcagccag
gcagatggctcgggcaccctctgggacaagaaggccgggcaggccgcgcttgcctgcatc
gaaaacctcgaggctgaatccccctatggcggcgacatgtccgcgcgcgattttgccgat
ctcctgggcgcactgctgagccagggcgaggtacgcgaccgcgatgcgccttatggctca
ataatgatatggggcacgctggaagcccgggtgcagggcgccgatctggtgatcctcggc
ggtctgaatgaaggcagctggccggaggccgccagccccgatccctggctgaaccgacag
ttgcgcaaccaggccggcctgttgctgcctgaacgccgcatcggcctgtcagcgcatgat
ttccagcaggctatcgccgcacccgaggtctggctgacccgcgccgaacggtcagaggaa
gccgacactgtgccctcacgctggctgaaccggctgaccaacctgttgtccggcctgccc
gatcagggaggccgtgaagcgctggacgcgatgcgtgccaaaggccgccagtggctcggc
tgggcggatgcgctggaggagccggcccctgccccgcagatgccgcgtccttcaccgcgt
ccgccggtttccgcgcggccgcggcgcctgacgattacggagattccccggctgatccgc
gacccctatgcgatatatgccaagcatgttctgcggctgaagcccctgacccctttggtt
caagaaccggacgcgctgctgcgcggcattgtggtgcatgaggtgtttgaacggttcatc
aaggaatcccaaacagatccttccctgctaaccgccggtcacctgatcgacaaaacccgc
gaattgctggaaagccacgtcccctggccagtcgcgcgcattctgtggcacagccgcatc
cgccggatcgccagtgattttgtgctggcagagcaggaacgccagtcgcgagctaaaccg
gtcgcttttgaagccaaaggcagcgcgcggctggagccgctggatttcaccatcgcctgc
cgcgccgaccgtatcgacatggacgaccgcggttttctgcatctgtatgactacaaaacc
ggtgccccccccagcgaagcacagcagaagaagttcgaaaaacaattgctgatcgaggcc
gccatggccgagcaaggcgcctttgacggcctgggcccggcagaagtggcccgcgccctg
ttcatcgggctggggtccagcatgaaggaagtacgtgcaccgctggaagcggaacctccg
gccaagatctgggacgagctgcacactctgatcggggcctatttcgagcctgaacaaggc
tattcgagccgccgcatggtgtatcgtgacgatatcgccggcgactatgaccaccttgcg
cgctatggtgaatgggaccgcagcgccacaccgcagccggaggatctgtcatga
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