Leisingera methylohalidivorans: METH_20425
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Entry
METH_20425 CDS
T02961
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lmd
Leisingera methylohalidivorans
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmd03032
]
METH_20425
03036 Chromosome and associated proteins [BR:
lmd03036
]
METH_20425
03400 DNA repair and recombination proteins [BR:
lmd03400
]
METH_20425
DNA replication proteins [BR:
lmd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
METH_20425
Chromosome and associated proteins [BR:
lmd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
METH_20425
DNA repair and recombination proteins [BR:
lmd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
METH_20425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AHD02685
UniProt:
V9VZ85
LinkDB
All DBs
Position
complement(4023702..4023989)
Genome browser
AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVAALAEEMGSDKKVAGSALEAVCSLITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFTKEADKVVKMTIAKALKDSVNG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgatgaccaaaacccagcttgtcgccgctctggcggaagaaatgggcagc
gacaaaaaagtcgcaggttccgccctggaagcggtctgctcgctgatcacccgcgaagtg
tcgggcggcggtgccgtgactctgccgggcgtcggcaagatctactgccgcgagcgcccc
gagcgcgaagtgcgcaacccggccaccggcgagaagttcaccaaagaagccgacaaagtg
gtgaaaatgaccattgcaaaggcgctgaaagacagtgtgaacggctga
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