Leisingera methylohalidivorans: METH_21395
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Entry
METH_21395 CDS
T02961
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
lmd
Leisingera methylohalidivorans
Pathway
lmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lmd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
METH_21395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmd02000
]
METH_21395
Transporters [BR:
lmd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
METH_21395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
AHD03382
UniProt:
V9W2H2
LinkDB
All DBs
Position
unnamed:51779..52936
Genome browser
AA seq
385 aa
AA seq
DB search
MHTKPPVLRVLGTGVTLINTILASAEADLGIRLEFTALDGIEAQRRGVLAPESFDIYDQW
FHDLDLVWPARSLRPIEVNRISCWDEVRNWPVLQSGSDRSVSRGTPLDRLFVQENGELGR
AASSRISMLPTVYNADSFAIVGDSSTPEPTSWGDLLSEQWRGRVAIQADAAIGVPDLLLA
LRARGEFKCENPENLTLSEIGSFIRLVKQYQLSGHFAGFWTDRTPGAEGAAKLSTMWWSN
YLSQKARGIPIRMCAPREGYRGWCGGMALSRHLDQHTEELAYAYLNWWLTGPAGAIMARN
GAYMAAPGAARAHLSTVEWDFWYGGKPAASDICDAFGNVVYQPGERREGGSYEKRQRQIV
IWNSVMEEHNFLVRLWDVIATGALI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgcacaccaaaccgccggtgttgcgcgtgctgggaaccggggtgacgctgatcaacacg
atcctcgcctcggccgaagctgatctgggcatccggcttgaattcaccgctctggacggg
atcgaagcgcaacgtcgtggtgtgctggcacctgagagtttcgacatttacgatcagtgg
ttccacgaccttgatctggtctggcctgcgcggtcgctgcgtcctatcgaggtaaaccgg
ataagctgctgggacgaggtccgcaactggccggtgttgcagagcgggtcggacaggagc
gtgtcgcgcgggacgcccctggaccggttgttcgtgcaggaaaacggcgagttgggacgt
gcggcatcgagccggatttcgatgctgccgacggtgtataatgccgacagttttgccatt
gtcggagacagctccacccccgaacccaccagctggggcgatctcttgtccgagcagtgg
cgcggcagggtcgccattcaagcggatgcagccattggtgtacctgacctgttgctggca
ttgcgggcgcgaggggaatttaaatgcgaaaaccccgaaaacctgaccctcagcgaaatc
ggaagtttcatccgcctcgttaagcaataccaattgtcgggtcatttcgccggtttctgg
accgacaggacgcctggtgccgagggggccgcaaaactatcaacgatgtggtggtcgaat
tacctatcgcaaaaggctaggggcattcccatccggatgtgcgcaccgcgcgaagggtat
cgcggctggtgcggcggtatggccctgtcgcggcatctcgaccagcacaccgaggagctg
gcctacgcgtacctgaactggtggctaaccggcccagcgggcgcgatcatggctcgaaat
ggtgcctatatggcagctcctggggcggcgcgcgcgcatctgtcaacggttgagtgggat
ttctggtatggaggcaaaccggccgcttccgatatttgtgacgcgtttggcaatgtcgtc
tatcagccgggagagcgccgcgaaggcggcagctacgagaaacggcaaaggcaaatcgtg
atctggaattccgtgatggaggagcacaatttccttgtcagactatgggatgtgatcgcc
acaggcgcgttgatctag
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