Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293: LEUM_0393
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Entry
LEUM_0393 CDS
T00411
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
lme
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Pathway
lme03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LEUM_0393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lme03400
]
LEUM_0393
DNA repair and recombination proteins [BR:
lme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LEUM_0393
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LEUM_0393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_29
AAA_21
AAA_22
AAA_23
AAA_25
nSTAND3
AAA_33
AAA_18
ATPase
APS_kinase
AAA_14
Viral_helicase1
DnaJ_CXXCXGXG
cobW
NACHT
MMR_HSR1
Septin
MeaB
T2SSE
NTPase_1
NB-ARC
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABJ61515
UniProt:
Q03Z57
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All DBs
Position
349499..352357
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AA seq
952 aa
AA seq
DB search
MAKDHIEIRGARAHNLKNIDVNIPKNQLTVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSNNPRSTVGTVTEINDYFRLLYARVGRP
DDPKDGTKIMYTIDQMVEYTLNNLPEGTRLQVFAPIIRGKRGSHETAFDHMRKQGYIRAR
VDGDIIEIDSQQLSLNKNKPHDIDVMIDRIVLRGNSRSRLFDSIEAAVRLNDGQVELDVV
TRDDENPVAPLKFSDHYLGELKDFRAGRLEPRLFSFNAPLGACEFCQGLGVTREVDIDLV
IPDDAKTLNEGAILPWNPISSNYYPEMLRQFAEQFAIDMDTPFNKLPKKQQDLILNGSDE
KDFHFHYKNDFGGVRDVDIPFEGVINNIARRFTETNSDFTREQMTHYMTELKCKACGGYR
LNKAALSVKINGKHIGEVSELPVDQELAFFNSVSLGQQDSEIASPIIKEIKDRLGFLQSV
GLKYLTLSRSARTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDMLLESMHR
MRDLGNTLVVVEHDEDTMRAADYLIDVGPGAGALGGTIVASGTPAEVEANKSSLTGQYLS
GKKFIAIPAKRRKGNGNWITVKGAKENNLKNITAKIPLGKFVAVTGVSGSGKSTLVNTVL
KRALKQKLNNNSEKPGAYRSIEGTENIEQIVDIDQSPIGRTPRSNPATYTGVFDDIRDLF
SQTNEAKMRGYNKGRFSFNTKGGRCENCRGDGVIKIEMNFLPDVYVACEVCGGTRYNSET
LEVTYKGKNISQVLDMTASEALEFFTPIPKIAKKLQTINDVGLGYVKLGQSATTLSGGEA
QRMKLASELHRRTNGKTIYILDEPTTGLHTDDIARLLEVLERLVDAGNTIVVIEHNLDVI
KSADWIIDMGPEGGAGGGKVLVAGTPEKVMKTAGSYTGKYLKEVIERDLSRA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatcatatcgaaatacgcggtgctcgcgctcataatttaaaaaatattgat
gtaaatattcctaaaaatcaactcacagtcgttactggtctatctggatcaggtaaatca
tcattagcttttgataccctatacgcagaggggcaaaggcgctacgtggaaagtttaagt
tcttatgcacgccaatttttaggtcaaatggacaaaccagatgtcgattctattgatggt
ttatcacctgctatttctatcgaccaaaaaacaacatctaataatccacgctcaaccgtt
ggtacagtgactgaaatcaatgattacttccgtttactatacgcacgtgttgggcgaccg
gatgatccaaaagatggtacaaaaattatgtatacaatcgatcaaatggttgaatataca
ttgaataacctgcctgagggtacaagattacaagtatttgcaccaatcattagaggaaaa
cgtggatcgcatgaaacagcatttgaccatatgcgcaaacagggatatattcgagctcgt
gtagatggagatattattgagattgattcacagcagttgagtcttaataaaaacaagcct
cacgacattgacgttatgatcgatcgaattgttttacgtggcaattctcggtcacgtcta
tttgactcgattgaagcagctgttcgtttgaatgacggccaagttgaacttgatgtggta
actcgtgatgatgaaaatccagttgcaccattaaagttttctgaccactatcttggagag
ttgaaggattttcgtgcagggcgattagaaccgcgcttgttcagtttcaatgcaccatta
ggagcttgtgagttttgtcaaggtttgggtgtcacgcgcgaagtggatattgatttagta
attccggacgatgcgaaaaccttgaatgagggagctattctgccatggaatccaatatca
tccaattattatccggaaatgttgcgtcaatttgctgagcaatttgctattgacatggac
acaccatttaataaacttcctaaaaaacaacaagatttaattctgaatggttctgatgaa
aaggattttcacttccattataaaaatgattttggcggggttcgtgatgttgatatcccc
tttgagggagtaataaataacattgctcgccgtttcacggaaacaaattcagatttcacg
cgcgagcaaatgactcattatatgacagaattaaagtgtaaagcctgtggcggttatcgc
ctaaacaaggccgcactttcagtcaaaattaatggcaaacatattggtgaggtgtcggag
ttaccggttgatcaagaattggcattttttaatagtgtttccttgggacaacaggatagt
gagattgcctcgcctattatcaaagaaattaaggatcgtcttggcttcctacaaagcgta
ggtttaaagtatttaacactttctcgttcagcacgaacgctttctggcggagaatctcag
cgaattcgtttggctactcagattggatctaatttatcaggagttctttatgttttagat
gaaccttccattggtttgcaccagcgtgacaatgatatgttgctagagtcaatgcatcgt
atgcgtgacttaggaaataccttagttgttgtcgagcacgatgaagatacaatgcgtgcg
gctgattatttgatagatgtcggcccgggtgctggtgctttgggcggtactattgtggct
agtggcacgccagctgaagttgaagccaacaaaagctcattaactggacaatatttatct
gggaaaaaatttattgcaatacctgccaagcgccgaaaagggaatggcaactggattacg
gtgaaaggcgccaaagaaaataacttaaaaaacattactgcaaagatacctctaggaaag
tttgttgcggtaacaggtgtttcaggttctggtaaatcaacattagtcaatacagtgttg
aagcgagctttgaagcaaaaactaaataataactctgaaaaaccaggtgcgtatcgatcg
attgagggcactgaaaatatagaacaaatagttgatattgatcaatcaccaattggacgt
acaccacgttctaatcctgcgacctatacaggtgtattcgatgatattcgtgatttgttt
tcacaaacaaatgaagctaaaatgcgtggatacaacaaaggacgcttttcatttaacaca
aaaggtggtcgttgtgagaattgtcgtggcgatggtgtgatcaaaatagaaatgaatttc
ttgcctgatgtgtatgtagcctgtgaagtttgtggtggtactcgttataattcagaaacg
ttggaagttacctataaaggcaaaaatatatcacaagtcttagacatgactgcttcagag
gcacttgaatttttcacgcctattccaaaaattgctaaaaagctacaaacgattaatgat
gtgggcttgggttacgtaaaactagggcaatctgcaacgaccttgtcaggtggtgaagcc
caacgtatgaaattggcatcggaacttcatcgacgcactaatggtaaaacaatttatatt
ctggatgaaccaactactggtttacatactgacgacattgctcgcttgctagaagtgctg
gaacggctagtagatgctggcaatactattgtagttattgagcataacttggatgtgatt
aagtcagctgattggataattgacatgggtccagaaggcggcgctggtggtggaaaagtt
ttggtcgccggcacacctgaaaaggtgatgaaaacggcaggatcttataccggtaagtac
ttgaaagaagtaattgagcgcgatttgtcacgagcttaa
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