Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293: LEUM_0527
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Entry
LEUM_0527 CDS
T00411
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lme
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Pathway
lme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEUM_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lme03400
]
LEUM_0527
Enzymes [BR:
lme01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LEUM_0527
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LEUM_0527
DNA repair and recombination proteins [BR:
lme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LEUM_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ABJ61642
UniProt:
Q03YT0
LinkDB
All DBs
Position
493320..494153
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AA seq
277 aa
AA seq
DB search
MPELPEVETVRRGLEKLIIGSKIIDVQLPYPKVITGDGQQFITGVMNTEFKQIDRRGKYL
LLRLANNHTIVSHLRMEGQYSVESLETVPYKHTEIVFELSDKRALFYNDTRRFGRMALTT
TGFENTEVPSLSKLGPEPTEEQLTLSYMMAIFSKSRRPVKTFLLDQTQIAGIGNIYADEV
LWQSKIHPKTPANVLDEVQLSVLRANIISEIKRAIKHHGTTVHSFSNVFGEVGKFQNELQ
AYGHAGEPCLRCNTPMVKIKVGQRGTTFCPFCQVEKD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccagaagttgaaacagtcagacgtgggcttgaaaaactaattattggc
agcaaaattattgatgtacagttaccttacccaaaagttattactggtgatgggcagcag
ttcatcaccggtgtcatgaacacagaatttaaacaaattgatcgtcgtggtaaatattta
ttactacgtttagcgaataatcatacgattgtttcgcacttacgaatggaagggcaatat
tcagtagagtcccttgagacggtcccttataaacatacagagattgtctttgaattatct
gataagcgagctttgttttacaatgacacgagacgctttgggcgcatggcgttgaccaca
actggttttgaaaacacagaagtgccttcgttgtccaaattaggaccagaaccgacagag
gagcagctgactttatcttatatgatggccattttttcaaagtctagaaggcctgttaaa
acatttttattggatcaaacacaaatagctggtattggtaatatttatgctgatgaggtt
ctgtggcaaagcaaaattcatcccaaaacgccggccaatgtactagatgaagttcaactg
agtgttcttagagcaaacatcatttcagaaattaaacgagcgattaagcatcacggtaca
acagtgcatagttttagtaatgtttttggtgaggtgggcaagtttcaaaatgaattacag
gcgtatgggcatgctggcgaaccatgtttacgttgcaatacgccaatggttaaaataaaa
gttggtcaacgtggcacgacattttgtccattttgtcaagtggagaaggattaa
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