Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293: LEUM_0696
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Entry
LEUM_0696 CDS
T00411
Name
(GenBank) ATP-dependent DNA helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lme
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Pathway
lme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LEUM_0696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lme03400
]
LEUM_0696
Enzymes [BR:
lme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LEUM_0696
DNA repair and recombination proteins [BR:
lme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LEUM_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
OB_YrrC
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
SLFN-g3_helicase
AAA_12
AAA_22
HHH_5
TrwB_AAD_bind
NPHP3_N
AAA_16
nSTAND3
TIP49
UvrD_C
ORC-CDC6-like
AAA
AAA_28
TraI_hel_assoc_N
PIF1
Helicase_RecD
UvrD-helicase
Cullin_Nedd8
Gal11_ABD1
RsgA_GTPase
NACHT
Zeta_toxin
AAA_29
AAA_5
NTPase_1
AAA_7
TsaE
Baculo_gp41
Motif
Other DBs
NCBI-ProteinID:
ABJ61806
UniProt:
Q03YB6
LinkDB
All DBs
Position
667521..669908
Genome browser
AA seq
795 aa
AA seq
DB search
MAYPEKQLDKITGTLQNVIFSSTESYFKILSVHIEESTLEDWQEPEMIATGTFADVQEGS
VYGFYGQLVRHPKYGQQFKVDHYENELPPDENGLIKYFASGQFTGIGKKTAEKIVNHLGL
NAVNLILDDAKILDGIVKAETARKLARTLRLNLGLERLFQIGNQFGIGADIAGRLYDQYG
NEAQDILTQDPYRLVFEFDGISFKKADDIGHKVGVDKFDERRMQAAVYATIMNVTFQYGH
MFLSHDQLLLSVEQMLHQNNTEMSNQIQKAIQSLIESNILVNDDGRYYAKRLYIAEKETA
INLKRLLNTSSPLNITANDIDESFVTPGKMTLDQIQVEAVKTGLKSQIFLLTGGPGTGKT
TIIRTMVATWKKMIQNRAKFADNTKDFLKNYQVRMASPTGRAAKRMTEVTGYDASTIHRL
LGIADLDEPEFNADNPIAGGLLIIDEASMLDIELTSKLLAAVPNGMKVIIVGDSDQLPSV
GPGNVLEDLVSSGDITHIELEVIYRQGRGSSITELATHIKNGELPADFLENQPDRSSFMV
NSEQASQAIEQVVALAIKKGYTQDDLQILTPMYKTSAGVIALNQMAQKLFNPLKSNQKSL
QFGMTIFRKGDKVLQLENDSERDVYNGDMGKIIAVQYKSDIGNDDNEDRLIIDFDGKELA
YPKKNLNQLSLAYATTVHKAQGNEFQLVIMVLTNHFGLMLNRNLLYTGITRAKEALILVG
EYTAFERASRTLVPKRFTFLQQRLSHSKTEVNEHDSSDESETIPEKTPHLTTTMVISSAV
NPMIGMENITPYDFM
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcatacccggaaaaacaattagataaaataactggcacgttacaaaatgttattttt
tcatcgacagaatcctattttaaaattttgtcggtacatattgaagaatcaactttagaa
gattggcaagagccagaaatgattgccactggaacatttgctgacgtccaagaaggaagt
gtatacggattttatggccaattggttcgacatccaaagtacggacagcaatttaaagtc
gatcattacgaaaatgaactgcctcccgatgaaaacgggttgattaagtattttgctagt
ggccaatttactggaattggtaaaaaaacggctgaaaaaattgttaatcatttgggattg
aatgctgtcaatctaattctagatgacgcaaaaattcttgacggtattgtaaaagcagaa
acagctcgaaaactggcgcgtacgttgcgacttaacttaggtctagaacgcttgttccaa
attggcaatcaatttggtattggtgcggacattgccggacgtttatatgatcaatacggt
aacgaggcacaagacattttaacgcaagatccttaccgtttagtatttgaatttgatggc
attagttttaaaaaagccgatgatattggtcataaggttggtgtagataaattcgatgaa
cggcgtatgcaagccgctgtttacgcaacaattatgaatgtgacgtttcaatatggtcat
atgtttttatcacacgatcaactattattgtcagtcgagcaaatgttgcatcaaaacaat
accgaaatgtcgaatcaaattcaaaaggccatccagagcttaattgaaagcaatattttg
gttaacgatgatggccgttattatgcgaaaaggttgtacattgctgaaaaagaaacggct
attaacttaaaacgattattaaatacaagttctccattgaatataacagcaaatgatatt
gatgaatcatttgtgacgcctggaaaaatgacgctcgatcagatacaagttgaggcggtt
aaaactgggttgaaatcacaaattttcttgttaacaggtggaccaggaactggaaaaacg
acaattatccgcacaatggtcgccacttggaagaaaatgattcaaaatcgtgcaaagttt
gcagacaatactaaagattttctcaaaaattatcaggtcagaatggcttcaccaacagga
cgtgcagcaaagcggatgactgaggtaacgggttatgatgcttcgacaatccatcggcta
ctgggtattgctgatttggatgagccagagtttaatgcggataatcctatcgcaggcggt
ctactaataatagatgaagcgtcgatgctagatattgaattaacttcaaaattgctagca
gcggttccaaatgggatgaaggtaattatcgtcggagatagcgatcaactaccgtcggtt
ggaccaggcaatgtattagaggatttagtgagtagcggagatatcactcatattgaatta
gaagttatctatcgacaaggccgtgggagcagcattactgaacttgcaacgcatattaaa
aacggtgagttaccagcagatttcttagagaatcaaccagatcgttcgagttttatggta
aattcagagcaagcttcgcaagcaattgaacaagtggttgcattggcgattaaaaaaggt
tacacgcaagacgatttacaaatattaaccccaatgtacaaaacatctgccggtgtaatt
gccttaaatcaaatggctcaaaaattgttcaatccgcttaaatcaaatcaaaaaagtttg
cagtttggaatgacaattttccgaaagggtgataaggtcttacagctagaaaatgacagc
gagcgagatgtttataacggagatatgggcaaaataattgctgtccagtacaagtctgac
attggcaatgatgataatgaagatcgcctcatcattgattttgatggtaaagaattggct
tatcccaaaaaaaatttgaatcaactgtcattagcgtacgctacgaccgtccataaagca
caaggtaacgagtttcaattggttatcatggttttgacaaatcattttggtttaatgctt
aatcgaaatttattatatacaggaattaccagagccaaagaggctttgattcttgtggga
gaatacaccgcatttgaacgtgcttcacgcacactggtgccgaaaagattcacattcctg
caacaaaggttgagtcacagcaaaactgaagttaatgagcacgatagttcagatgaatcg
gaaactatccctgaaaaaacacctcatttgacaacaacaatggttattagtagtgcggtt
aatccgatgatcggaatggaaaatattaccccatatgatttcatgtaa
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