Leptotrichia mesophila: AB8B23_01230
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Entry
AB8B23_01230 CDS
T10902
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lmes Leptotrichia mesophila
Pathway
lmes00061
Fatty acid biosynthesis
lmes00071
Fatty acid degradation
lmes01100
Metabolic pathways
lmes01212
Fatty acid metabolism
lmes02024
Quorum sensing
lmes04146
Peroxisome
Module
lmes_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AB8B23_01230
00071 Fatty acid degradation
AB8B23_01230
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AB8B23_01230
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB8B23_01230
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lmes01004
]
AB8B23_01230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lmes04147
]
AB8B23_01230
Enzymes [BR:
lmes01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AB8B23_01230
Lipid biosynthesis proteins [BR:
lmes01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AB8B23_01230
Exosome [BR:
lmes04147
]
Exosomal proteins
Exosomal proteins of breast milk
AB8B23_01230
Exosomal proteins of breast cancer cells
AB8B23_01230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Acyltransferase
PP-binding
AMP-binding_C_3
SWIRM-assoc_2
Sol_i_2
DpnD_N
Motif
Other DBs
NCBI-ProteinID:
XDU64827
UniProt:
A0AB39VC72
LinkDB
All DBs
Position
257031..259511
Genome browser
AA seq
826 aa
AA seq
DB search
MFLERTERLALVDFDNKHINYIDLINNIKYFSEYVVELEKEKFGLIVMENRPEWIYSFFA
VWDKKSAGIALDANSNSDEILYVLEDSHPNVIFCSNETEGTIFEAVEKYSSKNTVKVINV
DKITVEQEKMNVIKNMQFELENPTGDETAAMLYTSGTTGSPKGVMLSFNNLNTEMEGLYE
KGIFDHRDQILAILPFHHVLPLTATVLLMLKYQTSIVFVEKIASKEIFDALEKNRVTAII
GVPRVFKLFYDGIKQQIDAKFITRFIYKMMSNVKSLKIKRKVFAKVHKKFGGHLDFIVVG
GAKMDPEISKFYETLGFYALEGYGLTETSPVIAVNSKKERKIGTVGKKLCNVDVKIVDEE
LWVKGPIVMKGYYNKPDKTAEVITEDGWFKTGDLATIDEEGYVTIRGRKNTMIVLSNGKN
IDPETLENRVIAQSNGLIKEIGIFNYKNKLAAIIVPDLLELRKRGITNTKAYIKNIVEDY
NLKAHNYEKVLDYKLFEEELPKTRVGKTRRFMLPDLYEKNEIVKKEKTPEPTDEAYKILK
EYVKKNKGIEPQPEENLELEIGMDSLDIVEFFAFIENSFGIQLDEEKFAEMPNLKLLSEY
INQKATKFEDSDVDWKQIINETKPIQDDKNRWVTKLLKVFQPIVDLYFRVKKVDRKKLTD
NPQIFVSNHQSFIDPLILGSLFPNKIVFNTLFLAIDWYFKKGVMKLLVSNGNVVLIDINK
NIRKSVEEIVGYLKSGKSIVIFPEGARTKDGKVAQFKKVFAIIAKELNVDVQCLGIKGAF
EAYSRYMKFPKPKKIEVAVLEKFSPEGSYDEITQKAEKIIREYVEN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagagagaacggagcgactggcattagttgactttgacaataaacatattaat
tatattgatttgataaataatataaagtatttttctgaatatgtagttgaactggaaaaa
gaaaaatttgggctgattgttatggaaaatcgtccagaatggatttacagcttttttgca
gtatgggataaaaaatcagctggaatagcccttgatgctaatagtaattcagatgaaatt
ttatatgtactggaagattcacacccaaatgtaattttttgttcaaatgaaacagaagga
actatttttgaagcagttgaaaaatatagttcaaaaaatactgtaaaagtaataaatgtg
gataaaattacagttgaacaggaaaaaatgaatgttataaaaaatatgcagtttgagctt
gaaaatccaactggagatgaaacagcggctatgctttatacttcagggacaactggaagt
ccaaaaggtgtaatgctgtcttttaataatttaaatactgaaatggaaggactttatgaa
aagggaatatttgatcatagagatcagatcttagcaatattgccgtttcaccatgttctg
ccattgacagcaactgtacttttgatgttaaaatatcaaacttcaattgtatttgtagaa
aaaattgcaagcaaggaaatatttgatgcgcttgaaaaaaatagagtaactgcaataata
ggtgttccgagagtattcaagctattttatgatggaataaagcagcaaattgatgcaaaa
tttattacacgatttatttacaaaatgatgagcaatgttaaatcattgaagataaaaaga
aaagtctttgcaaaagtccataaaaaattcggtggacatcttgacttcattgttgtcggt
ggagcaaaaatggatcctgaaatttcaaagttttatgaaacattgggattttatgccctt
gaaggttatggacttacagagacctcaccagttattgctgtaaattcaaaaaaagaaaga
aaaattggaacagttggaaaaaaattatgcaatgtggatgtaaaaattgtagatgaagaa
ttgtgggttaaaggaccaattgttatgaaaggttactataacaaacctgataagacggca
gaagttattactgaagacggatggttcaagacaggagatttagcaacaattgacgaagaa
ggatatgttacaattcgtggaagaaaaaatacaatgattgtcctttcaaatggtaagaat
attgaccctgaaacgcttgaaaatagagtaattgcacaaagtaatggattaatcaaggaa
attggtatttttaattacaagaacaagttagctgcaataattgttccagatttattagag
cttagaaaacgtggaattacaaatacaaaagcctacatcaaaaatattgtagaggactat
aatttaaaggcacataactatgagaaagtacttgattacaaactgtttgaagaagaactg
ccaaaaacacgtgttggaaagacacgtagatttatgttgccagatttatacgaaaaaaat
gaaatcgtaaaaaaagaaaaaacacctgaacctacagacgaagcatataagattttaaaa
gaatatgtcaagaaaaataaagggattgaaccacagcccgaagaaaatttggaacttgaa
atcggaatggattcacttgacattgtagaattttttgcatttatagaaaatagttttgga
attcagctagatgaagaaaaatttgctgaaatgccaaatctgaaactattatcagagtac
attaatcaaaaagcaacaaaatttgaagatagtgatgtagactggaaacagattataaat
gaaacaaaacctatacaagatgataaaaaccgatgggtaacaaaactgttgaaagtattt
cagccaatagttgacttatatttcagagtaaaaaaagttgacagaaaaaaattaacagac
aatccacaaatctttgtatcaaaccatcaaagttttatagatccattgattttaggatca
ctttttccaaataaaattgtttttaatacattgtttttagcaattgactggtattttaaa
aaaggtgtaatgaaacttcttgtttcaaatggaaatgtcgttttaattgatattaataaa
aatattagaaaaagtgtagaagaaatagttggatatctaaaaagtggtaaaagcatcgta
attttcccagaaggagcaaggacaaaagatggaaaagttgctcaatttaaaaaagtattt
gctataattgcaaaggaactaaatgtggatgttcaatgtcttggaataaaaggagcattt
gaagcatattcaagatacatgaagttcccaaaaccaaaaaaaatcgaagtagcagtgctg
gaaaaattctcgccagaaggaagctatgatgaaattacacaaaaagcagaaaaaattata
agagagtatgttgagaactaa
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