Leptotrichia mesophila: AB8B23_02190
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Entry
AB8B23_02190 CDS
T10902
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmes Leptotrichia mesophila
Pathway
lmes03410
Base excision repair
lmes03430
Mismatch repair
lmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB8B23_02190 (recJ)
03430 Mismatch repair
AB8B23_02190 (recJ)
03440 Homologous recombination
AB8B23_02190 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmes03400
]
AB8B23_02190 (recJ)
DNA repair and recombination proteins [BR:
lmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AB8B23_02190 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB8B23_02190 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB8B23_02190 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XDU64989
UniProt:
A0AB39VCL7
LinkDB
All DBs
Position
453852..456842
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AA seq
996 aa
AA seq
DB search
MRNTKWAAKIIPNPRQEREYIERDNKQENDEKTKKLKKSKTEKQNFENTNLSSVIDNDIL
KILYSRGITTEKKVREFLNPKLDNIQNPYGLQDMEKTVLEIEKAIKEQKNIWIYGDYDVD
GITSTSILYMALKELGAENVNYYIPIRDEGYGLNNEALKKIKESGADLVITVDCGITAFP
EVEFANSINLPIIVTDHHNLHGDKVPDAITVVNPKRPENKFSFEFLAGVGTIFMVILCLY
ERIGKKAKAYKYLDLVAIGTVADIVPLVEENRILTKFGLEQLSRSKNKGLRFLLYKLFST
QNSDFNEKTEYNSYDVGFIIAPVFNAAGRLKDAKMVVKLLISDNDREIEIIVKELINKNF
ERKELQNEIVEKVEKHIEESDLKEDYVIVDYSPEYHHGVIGIAASKIVDKYYKPAIIIEV
KEDEGIAVGSCRSIGNFNILEALQSMPELFVKFGGHSGAAGFTIGIKNLELFRKKINKFA
KTKLKEEDFVKIIEIDKQIPIQKVSYEFFQIIELLKPFGFGNPMPTFRTNNVLFENIKFI
GENKNHIMFDIKQKGFFNKNAVWFNSGEYFKELNENLFYDIVYKLKTEMFQDRYYTKVYV
EDVKVSQLKDDTLSYYHSLFNTSFPMKSVFYTNIELETEKKITMKMEFDQVSLFQGRKFI
GRLDYSISNLLILLNQYYNWNFIVKMEDVKQASNNNIVNILIKRDYNFKCYDYTQIGIFK
KIKEFLIGKMEYNSQTKELLAQFFKQNKNLIIKNIFDENEKYKYKMSNFENFLLTVGIYY
KKMTDKKSQIVISSDKKPAFNNFIKSYFDINEEYSENNYPFTLFYNYKDTEKLENIIKTD
FSMQNEINYEIDENSQNLEVNEEPKQLEYKKIEKIEFKNNENVENSESIVEKEQENTEKL
SEAGKQEVEKRFCIIINSEDFMVKTDDLDKNNIEEIDTKIEVPENIMFLENSTKKERKNA
KNIFVEYLPIEEKMKLKKLLTDGEKIYSDYSVNEIL
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacgaaatgggctgcaaaaatcattcctaatccacgacaggaaagagaatat
attgaaagagacaacaagcaggaaaatgatgaaaaaacaaaaaaattgaaaaaaagtaag
actgaaaaacagaattttgaaaatacaaatttaagttcggtaattgataatgatattttg
aaaatactttattcacgagggataacgacagagaagaaagtaagggagtttttgaatcca
aaacttgacaatattcagaatccttatggactgcaggatatggaaaagacagttttggaa
attgaaaaggcgataaaagaacagaaaaatatttggatatatggggattatgatgtggat
ggaattacttcgacatctattttgtatatggcgttaaaagagcttggggcggaaaatgtg
aactactacattcctattcgggatgaagggtatggactgaataatgaggctttgaagaaa
ataaaagaatctggggcagatttggtaattactgtggattgtggaattacagcatttcct
gaagtggagtttgcaaattctataaatttgccaattattgttactgatcaccataattta
catggggataaagttccagacgctattacagttgtgaatccaaaacgtcctgaaaataaa
ttttcctttgagtttctagcgggagttgggactatttttatggtaattctttgtctttat
gaaagaattgggaaaaaggcaaaagcatataaatatctcgatctggtggcaattggtacg
gttgccgatattgtgccgctggtggaagaaaacaggattttgactaagtttgggttggag
cagcttagccgctctaaaaataaggggcttagatttttgctgtataaattgtttagtacg
caaaattcagattttaatgagaaaactgagtataattcatatgatgtgggctttatcata
gcacctgtctttaatgcggctggaaggcttaaagatgcaaaaatggtggtaaaattgcta
atttctgataatgacagggaaattgagataatcgtaaaggaattgattaataagaatttt
gagcgtaaagaattacagaatgaaattgtggaaaaagtggaaaaacacattgaagaaagc
gatttgaaggaagattatgtgattgtggactattcgcctgaatatcatcacggtgtaatt
ggtatagcggcttccaaaattgtggataaatattacaagcctgcgattatcattgaagtg
aaggaagatgaaggaatagcagttggatcgtgccgaagcattgggaactttaatattttg
gaggcgttgcagtcaatgcctgaactttttgtgaaatttgggggacattctggagcggct
ggatttacgattggaataaaaaatttggaattatttaggaaaaaaataaataaatttgca
aaaacaaaactgaaagaagaggattttgtaaaaataatagaaattgataagcaaatccca
attcaaaaggtttcttacgaatttttccaaataatagaactgttaaagccatttggattt
ggaaatccaatgccgacgttcaggacaaataacgtactttttgaaaatataaaatttatt
ggagaaaataaaaatcatataatgtttgacataaagcaaaagggattttttaataaaaat
gctgtctggtttaattctggcgagtattttaaagagctgaacgagaatttgttttacgat
attgtttataaattaaagacggaaatgtttcaagatagatattatacgaaagtgtatgtt
gaggatgtgaaggtgtcgcagttgaaggacgatactttatcttattatcattcgcttttt
aacacatctttcccgatgaagtcggtattttatacaaatattgagctggaaacggaaaag
aaaattacaatgaaaatggaatttgaccaggtttcgctttttcaaggaagaaagttcatt
ggacggcttgattacagcatttccaacttgttaatacttttaaatcagtattataactgg
aattttattgtgaaaatggaggatgtgaagcaggcttcaaataataatattgtaaatata
ctgataaaaagagattataattttaaatgttatgattacacgcaaattggtatttttaag
aaaataaaagaatttttgattgggaaaatggagtataattcacagactaaagaattgctg
gcacagttttttaagcaaaataaaaatttgattataaaaaatatttttgatgaaaatgaa
aaatataaatataagatgtcaaattttgaaaactttttactaacagttggaatttattat
aaaaaaatgactgataaaaaaagtcagattgtgataagttcagataaaaagccagctttt
aacaattttataaaatcatattttgatataaatgaagaatattcggaaaacaattatcca
tttacattattttataactacaaggatacagaaaagctcgaaaatattataaaaacagat
ttttcaatgcaaaacgaaatcaattatgaaattgacgaaaatagccaaaatcttgaagtt
aatgaagaaccaaaacagctggaatacaagaaaattgaaaaaatagagtttaaaaataat
gaaaatgtggaaaactccgagagtattgtggaaaaagagcaggaaaatactgaaaagtta
agtgaagctggaaaacaggaagtggagaaaagattttgcataataataaattctgaagat
tttatggtaaaaacagatgatttggacaaaaataatattgaagagatagatacgaaaatt
gaagtgccagaaaatataatgtttttagaaaattcaacgaagaaagagagaaaaaatgca
aaaaatatttttgtagaatatttaccaattgaagaaaaaatgaaattgaaaaagttgctt
actgatggagaaaagatttattctgattattcagttaatgagattttgtaa
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