Leptotrichia mesophila: AB8B23_04065
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Entry
AB8B23_04065 CDS
T10902
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lmes Leptotrichia mesophila
Pathway
lmes03420
Nucleotide excision repair
lmes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB8B23_04065
03430 Mismatch repair
AB8B23_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmes03400
]
AB8B23_04065
Enzymes [BR:
lmes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB8B23_04065
DNA repair and recombination proteins [BR:
lmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB8B23_04065
MMR (mismatch excision repair)
Other MMR factors
AB8B23_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XDU65337
UniProt:
A0AB39VDN6
LinkDB
All DBs
Position
809218..811425
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AA seq
735 aa
AA seq
DB search
MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF
TNKAAREMKERATALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI
ITKIKKDMGIKDNDGVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFAEIYQKYD
EVLKANNAMDFSDLLLNARKLLDDAFVLERIQERYQYIVVDEYQDTNDIQYEMINMIAAK
YRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIKN
NKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNAQ
SRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSVG
EKTLEKIQEVANEKNISMLEALHYIDEIPVRASTKLALKEFYNLMQGIYSSLEEMSIKEI
FDEILIKTRYIDSIEDNKEDRVRNIEELLNSITEIEKQNPSMTLNEYLDMISLSSATDEM
EDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSISFDAPEEELEEERRLCYVAITRAK
KELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYVGGKYASLKGQSSSPRSFTPKIE
NFNPFSKDKLGIFGKKSGSQTTSNVNSKYKVGDVVNHKKFGRGKIKKVDAKSMVVEFMVG
EKKIALVLADKILEK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattttagatgaattaaatgaagagcagagaaaagctgcggaaaaaatagaa
gggcctgtattgatactggctggagcgggaagcggtaaaacacggacagttacttataga
attgcacacatggtaaaagaaatagggatttcaccgcttaatattctggcacttactttt
acgaataaagcggcaagagagatgaaggaaagggctacggcacttattggacatgaggcg
aataatcttgtagtttctacatttcactcgttttcggtaagattgcttaaaacttattct
gaaagaattggatatgggcgaaattttaatatttatgatgtggatgatcagaagtcgatt
attacaaaaataaaaaaggatatgggaattaaggataatgatggtgttcagccgggaaaa
cttgcaaatagaattagtaaattgaaggaacaggggataggaattaaggagcttgaacgt
gaaattgatatgagaattcctgcgaacaggctttttgccgagatttatcagaagtatgat
gaagttttgaaggcaaataatgcgatggatttttcggatttgcttttgaatgcgagaaaa
ttgctggatgatgcttttgttctggaaagaatacaggaaaggtatcagtatattgtggtg
gatgagtatcaggataccaatgatattcagtatgaaatgattaatatgattgcagcaaaa
tatcgaaatatctgtgtcgtaggagatgaggatcagagtatttatgcatttcgtggggca
aatattaataacattctgaattttgagagagattacaaggaagcatttacagtaaaattg
gaaagaaattatcgttctacaaagaaaatactggatacagccaatgaacttattaaaaat
aataaaagttcaaaagggaaaacactttggacagatggctcagatggagaaaaaatcaag
atttataatgcaatgactgtttatgatgaagcagatttcattgtgacagagatgaagaaa
aagaaaagagacggtgccgattacaaggatatgacgattttgtacaggacaaatgcacag
tcaagagttctggaggaaaaactgttgtctgcaaatattccatataaaatttatggcgga
atgcagttctttcaacgtaaggaaataaaggatattttggcatatttgagtcttttaaat
aataaaaatgataatcataatttttatcgtataattaatgttcccaaacgttctgttgga
gaaaagacactggaaaaaatacaggaagttgcaaatgaaaaaaatatttcgatgcttgaa
gcgcttcactacattgatgaaattcctgtaagagcatctacaaaactggcattaaaggaa
ttttacaatttaatgcaaggtatttactcaagccttgaagaaatgtcaattaaggaaata
tttgatgaaattcttataaaaacacgttatattgactcaattgaagataataaggaagac
agagttagaaatattgaggaattgttaaacagtattactgaaattgaaaagcaaaatcca
agcatgaccttgaatgaatatcttgatatgatttcgttaagttcagcaactgatgaaatg
gaagatgatgaaaattatgtaaaacttatgacaattcatagttctaaaggactagaattt
gattatgtctttcttgcgggaatggaagacgggctgttcccatcaatttcttttgacgct
cctgaagaagagctggaagaagagcgtagactttgctatgttgcgataactcgtgctaaa
aaagaactgtttatttcctattcttcatcaagaaaaatttggggaaaagatgacaattta
cgtcgtccatcaagatttatctacgaaatgaagcaagacaatctggaatatgtgggcgga
aaatacgcaagcctaaaagggcaatcttcatctccaagaagttttacaccgaaaatagaa
aattttaatccattttctaaagataaactgggaatatttggtaaaaaatcaggctctcaa
acaacttcaaatgtaaattctaaatataaagttggagatgttgttaatcacaagaaattt
gggcgtggaaaaataaaaaaagtggatgcaaaaagcatggttgtcgaatttatggttgga
gaaaagaagatagcgttggtactggcagataaaattttagaaaaataa
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