Leptotrichia mesophila: AB8B23_05460
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Entry
AB8B23_05460 CDS
T10902
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmes Leptotrichia mesophila
Pathway
lmes03410
Base excision repair
lmes03430
Mismatch repair
lmes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB8B23_05460 (recJ)
03430 Mismatch repair
AB8B23_05460 (recJ)
03440 Homologous recombination
AB8B23_05460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmes03400
]
AB8B23_05460 (recJ)
DNA repair and recombination proteins [BR:
lmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AB8B23_05460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB8B23_05460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB8B23_05460 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
XDU65601
UniProt:
A0AB39VCI1
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All DBs
Position
1056856..1058553
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AA seq
565 aa
AA seq
DB search
MKWELKSYNEDYLTSKSSEFGESRLISRLLLNRGIDTKEKVSKFLNSDKKDIHNPFLFEN
MEKVVERIKKAGKNKEKIVIYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGIGI
NKNLLNFLKKRDAKLFITVDISINNHEEILMLKNSGIDIIITDHHRQIGVLEDKNQEKEM
GILTINPKTSKTYPNKSLSGSGVAFKLADAIYERYGANKKILYDYMDIIMIGTVADVVPM
TDENRFIIKKGLNNLKKTKIKGLKYIINYLKINPRNITTSDIGFFIAPIFNALGRIDNSK
SVVNFFIQEDDFKLFSIIEEMKRANKIRRYLENEIYNELEEKIQRLERPKYIFMKSRKWH
SGVIGVVCSRISIKYNIPVILISIKNGYGKASCRSIEGINIFDILKSVSDKLERFGGHDL
AAGFLVSEKYLGEIEKHLRQRLARKNRENVQKTLYVDAWLNIEYLNKRKLHEINRLSPFG
LDNQEPNFMDSDVNFLNLTRFGINNRHFKGFVRKNNRIISVIGYNLGHKLKANNFYKKKF
KIVYTPIFKSGHSDLFIELKIKDFK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggaattaaaaagctataatgaagattatttgacatcaaaaagttctgaattt
ggtgaaagcagattaatttcaagactgcttttgaatcgaggaattgacacaaaggaaaaa
gtttctaaatttttaaattcagataaaaaagatattcataatccatttttatttgaaaat
atggaaaaagttgtagaaagaataaaaaaagctgggaaaaataaagaaaaaattgtaatt
tatggagattatgacgttgatggtatatctggagtagcatatctagtaataatgctacga
aagttgggacttaatgtcgattactatattccaaatcgtgttcacgaaggaataggtata
aataaaaaccttttgaattttttgaaaaaacgagatgcaaaattgtttataacagttgat
atttcaataaataaccatgaagagatattaatgttaaaaaatagtggtatcgatataatt
ataacagatcatcataggcagattggagttctggaagataagaatcaggaaaaagaaatg
ggtattcttacaataaatccaaagactagtaaaacttatccaaataaatctctgtcaggt
tcaggagttgcctttaaacttgctgacgctatttatgaaagatatggtgcaaataaaaaa
atactgtatgactatatggatattataatgattggaacagttgcagatgtagtaccaatg
actgatgaaaacagatttatcataaaaaaaggactaaataatttaaaaaaaaccaaaata
aaaggtttaaagtatattattaactatttgaagataaatcctagaaatataacaaccagc
gatattggatttttcattgcaccgattttcaatgcacttggaagaattgataattcaaaa
agtgttgtaaacttctttattcaggaagatgactttaaacttttctcgattattgaggaa
atgaagcgtgctaataaaatcagacgttatttggaaaatgagatttataatgaactggaa
gaaaaaatacagcgcctagaacgtccaaaatatatttttatgaaaagcagaaaatggcat
tctggcgtaattggggtagtttgctcaagaatctcaataaaatacaatattccagtaatt
cttatttcaataaaaaatggatatggaaaagcatcatgcagaagtatcgaaggaattaac
atttttgatattttaaaaagtgtgtcagataaattggagcgatttggaggacatgacttg
gcggcaggatttcttgtttcagaaaagtatttaggtgaaatcgaaaaacatctgcggcaa
agacttgcaagaaaaaatagggaaaatgttcagaaaactttgtatgttgacgcatggttg
aacattgagtatttaaacaaaagaaaattacatgaaataaataggctatcgccttttggg
ctagataatcaggaaccgaactttatggattcagatgttaattttctaaatttaacgaga
tttgggataaataatcgacattttaaaggatttgtcagaaaaaataaccgtattatttca
gtaattggatataatttaggacataaattgaaggcaaataatttttataagaaaaaattt
aaaatagtttatactccgatatttaagtctggacattcagatttatttatcgaattgaaa
ataaaggattttaaataa
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