Leptotrichia mesophila: AB8B23_05745
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Entry
AB8B23_05745 CDS
T10902
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lmes Leptotrichia mesophila
Pathway
lmes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB8B23_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmes03400
]
AB8B23_05745
Enzymes [BR:
lmes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AB8B23_05745
DNA repair and recombination proteins [BR:
lmes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AB8B23_05745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
XDU65658
UniProt:
A0AB39VEF1
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All DBs
Position
1124235..1125158
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AA seq
307 aa
AA seq
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MSKKEMFKIGSHVGMSGKDMLLGSVKEAVSYGSNTFMIYTGAPQNTRRKPIDELNIEAGL
KLMKENNIDIDDIVVHAPYIINLGNAVKPETFEIAVQFLRTEIERTDAIGAKRIVLHPGA
HVGEGEEVGINKIIEGLNEVLTKDQKTTVALETMAGKGTECGRSFEEIAKIIDGVKLKDK
LTVCFDTCHVHDAGYDIVNDFEGVIEQFDKIVGIDRISVIHLNDSKNVCGAHKDRHENIG
FGKIGFEVLNKIAHFEKFSHLPKILETPYVALSDDKKAKKVPPYKFEIEMLRAGKFDENV
LEKIKNQ
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaagaaatgtttaaaattggatcacatgtgggaatgagtgggaaagatatg
cttttggggtcggttaaggaagcggtttcttatggatcgaatacttttatgatttatact
ggagcaccacagaatacacggagaaagccaattgatgagctgaatattgaggctgggctt
aaacttatgaaggagaataatattgatattgatgatattgttgtgcatgctccttatata
attaatcttgggaatgctgtaaagcctgaaacttttgagattgcagtgcagtttttgaga
acggagattgaaaggacagatgctattggagcgaagagaattgttcttcatccaggtgct
cacgttggggaaggtgaagaagttgggattaataagattattgaaggactgaatgaagtt
ttgacgaaagatcagaaaacgactgtggcacttgaaacgatggctggaaaaggtacagaa
tgcgggagaagttttgaagaaattgcaaaaattattgatggtgtgaaattgaaggataaa
ctgacagtatgttttgatacttgccacgttcacgacgctggatatgatattgtaaatgat
tttgaaggagttatcgaacagtttgataaaattgttggaattgacagaatttcagtaatt
cacttgaatgatagtaagaatgtgtgtggtgcacataaagataggcatgaaaatatagga
tttggaaaaattggatttgaagtgttaaataaaatagcacattttgaaaaattttctcat
ttgccaaaaattctagaaacgccttatgtggctttgagcgatgataaaaaggctaagaaa
gttccgccgtataaatttgaaattgagatgcttagagctgggaagtttgatgaaaatgtg
ttagaaaagataaaaaatcaataa
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