Leptotrichia mesophila: AB8B23_08975
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Entry
AB8B23_08975 CDS
T10902
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lmes Leptotrichia mesophila
Pathway
lmes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB8B23_08975 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmes03019
]
AB8B23_08975 (rny)
Messenger RNA biogenesis [BR:
lmes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB8B23_08975 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
TMP-TENI
YfbR-like
Cellsynth_D
SID-1_RNA_chan
Motif
Other DBs
NCBI-ProteinID:
XDU64061
UniProt:
A0AB39V8F1
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Position
complement(1769413..1770987)
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AA seq
524 aa
AA seq
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MSISIAILLIVIFSFLTFFIAYFFGSSIFKKKYGDLNELELKIVDAKRRLETSKKEVERE
IESFRKEETLKVKEELLNEKKIADDEIKKMKSELATKEERIAKKEETLETKMERLEEREA
KNEKYREKLFRREKELEEMIANEEKELERISELTQEDARKIILTKLENELDHDKAVLIRD
YEYNLDREKDRISKRIISTAIGKAASDYVVDSTISVIQLPSEEMKGRIIGREGRNIRAIE
AATGVDLIIDDTPEAVVLSSFDGVRREVAKIALEKLISDGRIHPTKIEEVVAKAQHEVDE
SILDAAEQAILEVGIPTLPREVLKVFGRLKFRTSFGQNILQHSIEVAHIASALAAEIGAN
VDIAKRAALLHDIGKAFSHEQEGSHAINGGEFLRKFSKESEIVINAVESHHNEVEQLSIE
AVLVQAADSISASRPGARRETLSNYLKRLEQLEEIANSHEGIESSYAIQAGRELRLIVHP
DNIDDDKATILARDVAKEIEEKMQYPGQIKVTVIRETRAVEYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcaatagcgattttgttgattgttattttttcttttttaactttttttata
gcttatttttttgggagttcaatttttaagaaaaaatacggagatttgaacgaactggaa
ttaaaaatcgttgatgctaaaagaagacttgaaacatcaaaaaaagaagttgaaagagaa
attgaatcgtttagaaaagaagaaacactaaaagtaaaagaagaattgttaaatgagaaa
aaaatagcagatgacgaaataaagaaaatgaaatcagaacttgctacaaaagaagaaaga
attgccaaaaaagaagagacattagaaacaaaaatggaacggttggaagaaagagaagct
aaaaatgagaaataccgtgaaaaattgttccgaagagaaaaagaactagaagaaatgatt
gcaaatgaagaaaaagaattggaaagaatttcagaactgacacaggaagatgcaagaaaa
attattttgactaaactggaaaatgaactagatcacgataaagctgtattaataagagat
tatgaatataatttagacagggaaaaagatagaatttcaaaaagaattatttcaacagca
attggaaaagctgcttcagattatgttgttgattctacaatttcagttattcagttgcca
agtgaagaaatgaaaggtagaattattggacgtgaaggaagaaatataagagctattgaa
gccgcaacaggagttgatttgataattgatgatactccagaagcagtagtactgtcttct
tttgatggagtaagaagagaagttgctaaaattgcacttgaaaaattgatttcagatgga
cgtattcatccaacaaaaatagaggaagttgtagcaaaagcacagcatgaagtagatgaa
agcatattagatgctgccgaacaggctattttagaagtgggaattccaacattgccacgt
gaagtattaaaagtatttggacgtttgaaattcagaacatcttttgggcaaaatatttta
cagcactcaatagaagttgcacatatagcttcagctttggcagcagaaattggtgcaaat
gttgacattgctaaaagagcggcattattgcatgatataggaaaagcattttcgcatgag
caagaaggatcacatgctataaatggtggagaatttttaagaaaattttcaaaagaaagt
gaaattgtaataaatgctgtagaatcacatcataatgaagtagagcaattaagcatagaa
gctgtattagtacaagcagctgattcaatttcagcatcaagaccaggagcaagacgtgaa
acattatcaaattatttaaaacgtttggaacaattggaagaaattgctaatagtcatgaa
ggaattgaaagttcgtatgcgattcaggctggtagggaattaagattaattgttcatcca
gataatattgatgatgacaaagctacgatacttgctagagatgtagcaaaagaaattgaa
gaaaaaatgcaatatccaggacagataaaagttactgttattagagaaactagagctgtg
gaatatgcaaaataa
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