Listeria monocytogenes F2365 (serotype 4b): LMOf2365_1418
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Entry
LMOf2365_1418 CDS
T00174
Name
(GenBank) HDIG domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lmf
Listeria monocytogenes F2365 (serotype 4b)
Pathway
lmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMOf2365_1418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmf03019
]
LMOf2365_1418
Messenger RNA biogenesis [BR:
lmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LMOf2365_1418
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
HTH_6
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
AAT04193
UniProt:
Q71ZS1
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All DBs
Position
1406477..1408039
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AA seq
520 aa
AA seq
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MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIVEDAKKEAETTKKEALL
EAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKDTSLSKREATLERKEESIS
KRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIILNQVEEELTHDTAIMVKESEN
RAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEHIR
EVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVSKLAGILAGELGEDVTL
AKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENDVVINSIASHHGDTEATSVIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIIVEPDTID
DLSSYRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcaatcacgatcatctccagtttgcttttcttaatcgtcggtctagttgtt
ggttctctaatttttaaatctagtacagagaaaaaactggctgctgcaagggggactgcg
gaattaattgtagaggatgcgaagaaagaagcagaaactacaaaaaaagaagcattgctt
gaagcgaaggaagagaatcataggttacgtactgaaatcgaaaatgaacttcgtgggcga
agaacagagacacagaaagcagaaaatcgcttattgcaaagggaggaaaacctcgaccgt
aaagatacttctttaagtaaacgagaagctacacttgaaagaaaagaggagagtatcagt
aaacgtcaacaacaaattgaagagaaagaaagcaaactagctgagatgattcaagcggag
cagacagaactcgaaagaatttctgcgctcagcaaagaggaagcgaaatctatcatcctt
aaccaggtagaagaggaattaacacatgatacagcaatcatggtcaaagaatcagaaaac
cgggccaaggaagagtcggataaaaaagcaaagaatattctctcactagctatccagcgt
tgtgcagctgatcatgtggcagaaacaacggtatctgttgttaccttaccaaatgatgag
atgaaaggtcggattatcggacgtgaaggccgtaatatccgcacgcttgagacgttaacg
gggattgatttgataattgatgatacaccggaagcagtaattctttccggatttgatcca
attcgacgtgaaatcgctagaatcgccttagaaaaacttgttcaagatggaagaatccat
ccagctcgaattgaagaaatggtggacaaagcccgtaaagaggtggacgaacacattcgc
gaagtcggggaacaagcaacatttgaagttggaattcattccatccatcctgatttgata
aaaattcttggccgcttgcgttaccgtactagttacggacaaaacgttcttaaccactca
ctcgaagtttcaaaacttgcaggaattcttgcaggagagcttggcgaagacgttacgctt
gctaaacgggccggactacttcatgacatcgggaaagcaattgaccatgaaattgaaggc
agtcatgttgaaatcggcgtggaacttgctaccaaatacaaagaaaatgatgtggtaatc
aatagtattgcttcccatcacggagatacagaagctacttctgttatcgcagtattggtc
gcagcggcagatgcactttctgctgcaagaccgggagctcgtagtgaaacgcttgaaaat
tacatccgtcgtttagaaaaattagaagaaatttctgagtcttacgatggtgtagaaaaa
tcttatgctatccaagcaggacgtgaagtacgtatcatcgttgaaccagatacaattgat
gatctttcttcttaccgccttgctcgcgacataagaaaacgaattgaagaggaattagat
tatcctggtcacattaaagtgactgtcattcgtgaaacaagagcagttgaatacgctaaa
taa
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