Listeria monocytogenes F2365 (serotype 4b): LMOf2365_2462
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Entry
LMOf2365_2462 CDS
T00174
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
lmf
Listeria monocytogenes F2365 (serotype 4b)
Pathway
lmf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMOf2365_2462 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmf03400
]
LMOf2365_2462 (uvrB)
DNA repair and recombination proteins [BR:
lmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMOf2365_2462 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMOf2365_2462 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
HEM4
AAA
AAA_30
UB2H
AAA_7
AAA_19
AAA_22
DUF5662
DUF87
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AAT05227
UniProt:
Q71WT9
LinkDB
All DBs
Position
complement(2520236..2522212)
Genome browser
AA seq
658 aa
AA seq
DB search
MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPT
LVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEID
KLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQ
YDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREH
VSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRADNKLLEAQRLEQRTNYDLEMMEEM
GYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQM
LVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDP
IVEIRPIQGQIDDLMDEINNRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVK
TLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVAILDADKEGFLRSERSLIQTMGR
AARNENGRVIMYADKMTDSMRNSIGETERRRKIQIEYNEKHGITPKTIKKEIRGIIAATS
AADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggataaatttgagttagtttctaagtatagcccacaaggagaccaacctagagcg
atagaacaattagttgcgggattaaaaaaaggcttgaaacaccaaactttacttggtgca
accggtacagggaaaacttttaccgtatccaacgtgattcaggaagtaaataagccaaca
cttgtcatggcccacaataagacgttagcaggacagctgtatagcgagtttaaagaattt
ttcccaaataacgctgtagaatattttgtcagttactatgattactatcaaccagaagcc
tatgttccgcaaagcgacacatacatcgaaaaagatgcaagtatcaatgatgaaatagat
aagcttcgtcactctgctactgctgcgctttttgaacgtcgtgatgtaattatcattgcg
agtgtatcgtgtatttatggcttaggttcgccgattgaatatggagagatgctcgtttcg
cttcgtgttggtatggaaattagccgtgatcagctactgcgtaaattagtagacattcaa
tatgatcgaaatgatatagattttcaacgtggacgcttccgtgttcgcggtgatgttgtc
gaaattttcccggcatcaagagacgagcactgcatgaggattgaatttttcggtgatgaa
attgaacgtattagagaggtagatgcacttactggcgaaattattggagaaagagaacat
gtttccattttcccggcatctcactttgttaccagacctgatattatgaaaaaagcaatt
gttaatataaaagcggaactcgaagaccgcctccaagttttacgtgcagataataaatta
ctcgaagctcagcgccttgaacaacggacgaattatgatttagaaatgatggaagaaatg
ggttattgctctggtattgagaactattctagacatttatcccttcgtccagcgggagtt
acaccatacacgttactcgattacttcccagacgatttccaaatggtaattgatgagtca
cacgttacgatgccacaaatccgtggtatgtttaacggtgaccaagccagaaaacaaatg
ctagttgatcatggttttagactaccaagtgctttagataaccgtccgctaagattagaa
gaatttgaaaaacatatcaatcaaattatgttcatttccgccacaccaggcccttatgaa
ctagaaaaaaatccggatgtcattgaacaaatcatccgaccaaccggcttgctagatcca
atcgtagaaattcgcccgattcaaggacaaatcgatgacttaatggatgagattaataat
cgtgtcgagaaaaacgaacgtgttttaatcaccactttaacgaaaaaaatgtcagaggat
ttgaccaattatctcaaagaagctggtgttaaagtacaatatctccactcggaagtgaag
acgttagagcgaatcgaaatcattcgcgacctccgacttggtgtgtatgatgttatcgtt
ggaattaatttacttcgcgaaggaatcgatttacctgaagtatctcttgtcgctatttta
gatgcggacaaagaaggattccttcgttccgagcgttccttaattcaaacaatgggtcga
gccgctcgtaatgaaaacggtcgagtaatcatgtatgctgataaaatgaccgattcgatg
cgcaattctattggcgaaacagaacgccgtcgtaaaatccaaattgaatataatgaaaaa
catggcattacgccaaaaacaatcaaaaaagaaattcgtggtatcatcgcagcgacttct
gccgcagatgaaagagaagcagtgaagcaacatgatttaagcaaaatgtctaagaaagaa
cgcgatgtgttcattgaaggtatggaacatgaaatgaaagaagcagccaaagcacttgat
ttcgaacgtgctgctgaacttcgcgatgctttactggaaataaaagcggaaggatga
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