Listeria monocytogenes FSL R2-561: LMKG_00686
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Entry
LMKG_00686 CDS
T01985
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lmg
Listeria monocytogenes FSL R2-561
Pathway
lmg03410
Base excision repair
lmg03430
Mismatch repair
lmg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMKG_00686
03430 Mismatch repair
LMKG_00686
03440 Homologous recombination
LMKG_00686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmg03400
]
LMKG_00686
DNA repair and recombination proteins [BR:
lmg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LMKG_00686
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LMKG_00686
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LMKG_00686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEO25872
LinkDB
All DBs
Position
complement(1579464..1581815)
Genome browser
AA seq
783 aa
AA seq
DB search
MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQGQFDKFFHPEKYESYDP
FLFAEMDLAVARIKQAIERNEQILVYGDYDADGVTSIAVLMKTLRHLGADADFYIPNRFT
EGYGPNIAAFDMAKNQGTDLIITVDNGIAALEVMAHAKEIGLDVIVTDHHEPREIMPEAV
AVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKELLDLVAVGTVADLVSLTDENRLL
VQLGLRQLRESANLGLAVLAKKASLKLEEATEETIGFGLAPRLNAVGRLGPADPAADLLL
TEDPEEALFLAEEIDDANKERKQIVVDTTKLAMEAIEAKDTLGNVLVVYGEGWNTGILGI
VASKLVGTYSRPAIVLGIDPVTGIAKGSGRSVDAFHLYQALDKHRDLMMAFGGHPMAAGL
TLPAENLTELEAKLQEEASYLSEEDFRPALKIEEKIKLADVSVAFIAQLEKLAPFGMDNP
KPIFLLENMHLKGTKRIGADKTHLKTMLATEKNDATLDSIGFGVGDLVDKISPTAAVDVV
GELSINEWNNVKKPQLRMMDIHISHWQLFDVRNKSEWARILQEQTESRVFVCFEERTIGT
LGEQNYILVNEKADFVADFQTEELVFADMPTNIELVETIVRETKPERIFVHFDAAEGNQI
PAIPDRLAFAELYSLIKKFQPFPIEKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMDSG
QIIINEVVEKRNLDESLVYQQKVEEITTRKKLLYSNYTELHSWMKSMMETSIYPNAEELE
NGN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtgattcattcaaaatacttatggaatatcgaggaagcggcggaagataaagcaagtcaa
ttagcagaacagctaaaaatctcgcttccacttgcaaaactactttggaaaagaaaaatt
acaacgcaaggacaattcgataaatttttccacccagaaaaatatgaaagctatgacccg
tttttattcgcagagatggatcttgcggttgctagaattaagcaagcgatagaacgaaat
gagcagattttagtttatggagattatgatgcagatggggttactagtattgcagtttta
atgaaaacattgcggcatttaggagccgatgctgatttttatattcctaatcgctttacg
gaaggttatggcccgaatattgccgcttttgatatggctaaaaaccaaggaacagattta
attattacggttgataatggtattgcggcgcttgaagtaatggctcatgccaaagagatt
ggtttagatgttattgttacggatcaccatgaaccgcgtgagattatgccagaagctgtg
gctgttatccacccaaagcatcctaaatcagcttatccgtttgatgaactagcgggtgtg
ggtgttgcttacaaattatcgcacgctttacttggagaagagccaaaagaactgctcgat
ttagttgcagttgggactgtggcagatttagtttctttaacagatgaaaatcgcttactt
gttcaactgggattgcgtcaattacgcgaatccgccaaccttggactggctgtgctagct
aaaaaagctagtttgaaattagaagaggctacggaagaaacgattggctttggtttggca
ccacgactgaatgcagttggtcgattaggcccagcagatccagcggctgatttactttta
acggaagatccagaagaggcacttttcttagcggaagaaatcgatgatgcgaataaggaa
cggaaacaaatagttgttgatacaacaaagctcgcgatggaggcaattgaggcaaaagac
actttaggaaatgtgctcgttgtttacggtgaggggtggaataccggaatccttggaatt
gttgcttctaaattagttggaacatattctcgaccggcaattgtgttggggattgatcct
gtaactggaattgctaaagggtctggtcgaagtgtggacgcgtttcatttatatcaagcg
cttgataaacatcgtgatttaatgatggccttcggtgggcatccaatggctgcaggcctt
acattgccagccgaaaacctaactgaattagaagctaaattacaagaagaagcgagttat
ctttcagaagaagattttcgcccggccttgaaaatagaagaaaaaattaagcttgctgat
gtttcggtggcctttattgctcaacttgaaaaattagcgccttttgggatggataatcct
aaaccgatttttttgttagaaaacatgcatttaaaaggaacgaaaagaattggggcagat
aaaacccatttaaaaacaatgctcgccacagagaaaaatgatgccactttagactctatt
ggatttggcgtaggagatttggtagataaaatttctccgacagcagccgtggatgtggtt
ggagaattgtccatcaatgaatggaacaatgtgaaaaaaccgcaactacgaatgatggat
attcacatttcgcactggcaactctttgatgtacgtaataaatcagagtgggctaggata
ctccaagaacaaacagaatcaagagttttcgtttgttttgaagaaagaacgattggtacg
cttggagaacaaaactatattttggtgaatgaaaaagctgattttgtggcagatttccag
acagaagaacttgttttcgcagatatgccaacgaatatcgaattagttgaaacgattgtt
cgcgaaacaaaaccagagcgtatttttgtccattttgatgcagcagaaggtaatcaaatc
ccggcaataccagaccggttagcttttgcagaattatatagtctcattaaaaaattccaa
ccatttccaatcgaaaagtacacaccacggctaatgcaaaaatttggttggaataaagag
caaatagatttcatgtcaaaggtgttttttgatttagaatttgctaaaatggatagtggt
cagattattatcaatgaagttgttgaaaaacgtaatctggacgagtcacttgtttatcaa
caaaaggtagaagaaataactacaagaaaaaaactgttgtactccaattatactgagctt
catagttggatgaaatcaatgatggaaacatcaatttacccgaatgcggaggaactagaa
aatggaaattaa
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