Listeria monocytogenes FSL R2-561: LMKG_02478
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Entry
LMKG_02478 CDS
T01985
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lmg
Listeria monocytogenes FSL R2-561
Pathway
lmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMKG_02478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmg03021
]
LMKG_02478
03019 Messenger RNA biogenesis [BR:
lmg03019
]
LMKG_02478
Transcription machinery [BR:
lmg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LMKG_02478
Messenger RNA biogenesis [BR:
lmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LMKG_02478
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
ATPase_2
NACHT
AAA_22
AAA_25
AAA
Mor
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AEO26893
LinkDB
All DBs
Position
complement(2644898..2646004)
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AA seq
368 aa
AA seq
DB search
MSWKLFRMRDLVFLRPINYSSSSEDIYISASQIRRFELRTGDRVSGKVRPPKENERYFGL
LHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETEKYPISTRTIDLIAPIGFGQRGLI
VAPPKAGKTVLLKEIANAITTNHPDTELIVLLIDERPEEVTDIERSVKADVVSSTFDEVP
ENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHR
PKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRQLAERRVFP
AIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQGDGLDISERFVRYLKKTDNNEAFYEL
LQEEMFKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttggaaattattccgaatgagggatttggtttttttacgacctattaattattcc
tctagctcggaagatatttatatttccgcttctcaaatcagacgttttgaattaagaacg
ggagacagagtttcaggaaaagttcgtccaccaaaagaaaatgaacgttattttggttta
ctgcatgttgaggcagttaacggagaaaacccagaagtagcgaaagaaagagtgcatttt
cctggtttgacgccactttatccggatcgtcaaattcatttagaaacagaaaaatatcca
atttcaacacgtacaattgatttgattgctccaattggatttggacagcgtggacttatt
gtagcgccaccaaaagcagggaaaactgttttgctcaaagaaattgcgaatgcgattacg
actaatcatccagatactgaattgattgttttgctaatagatgagcgtccagaagaagta
actgatattgagcgctctgtaaaagcggatgtagtcagttccacatttgacgaagttcca
gaaaatcatattaaagttgcagaacttgtgcttgaacgcgcaatgagattagtggagcaa
aaacgcgatgtagttattttgatggacagtatcacgcgtctcgcacgagcgtataattta
gttataccaccaagtggccgaacactttcaggggggattgacccagcagcttttcataga
ccaaaacggttttttggagcagcacgaaatatagaagagggcggtagtttaacaatcctt
gctactgcgttagttgacacaggctcacggatggatgatgttatttacgaagaattcaag
ggtactgggaacatggaattgcatcttgatcgtcaacttgctgaacgtcgtgtctttcct
gcgattgatatgcgtcgatctggaacaagaaaagaagaacttttattatccaaagaacgc
ttagaacaactatggaaaatccgtaaagccatgccaaaacaaggtgatggacttgatatt
tcagaacgctttgtccgttacttaaagaaaaccgacaacaatgaagctttttatgaatta
ctacaagaggaaatgtttaaaaaataa
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