Leptospira mgodei: AB3N62_00435
Help
Entry
AB3N62_00435 CDS
T10765
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lmgo Leptospira mgodei
Brite
KEGG Orthology (KO) [BR:
lmgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmgo03009
]
AB3N62_00435 (rlmD)
Enzymes [BR:
lmgo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AB3N62_00435 (rlmD)
Ribosome biogenesis [BR:
lmgo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB3N62_00435 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_31
Cons_hypoth95
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
XDD54313
LinkDB
All DBs
Position
1:complement(88738..89937)
Genome browser
AA seq
399 aa
AA seq
DB search
MTTTKPGGKICTHFGTCGGCNYLDIDYTKELRKKEQNIKELFKTFRHLEFRTIVPSPSPE
FYRHKIQLPFGRRIIGNKTLLTLGLFNKESTFVLDQTECDIQDPGLTEIALAVKQWARRE
GLLPYNEKSKRGMMKYLVARKSFSTGEIILGIVTAKEDLPHPKDASKRLHTAIQNRIGKT
GKLGKIVGIIHNINTRHTTMALGREEHLLWGRPYIHEHFGKHKFRVGLSTFLQVNPIQTP
SLYNLVLDEIEPESRVIDAYSGIGTISFWISANCKEVMGIEENPASHRTALESIKYNHVH
NVRFRKGRVAEVLPSLYGKNYDTLVLDPPRVGLGAEVAETILGMGFKKIVYVSCDPMSLR
EDTNLLARQYFLNSVQPVDMFPRTDHVETVAVFRNKNLT
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaccaaacccggtggaaaaatctgtacacacttcggaacttgcggcggatgt
aactatttagatattgattacaccaaagaacttcgaaaaaaagaacaaaacatcaaagaa
ctatttaaaacctttcgccatttagaatttcgcaccatagtccccagtccctctcctgaa
ttttatcgtcacaaaatccaacttccttttggaagaagaatcataggaaacaaaaccctt
cttactttaggtctattcaataaagaatccacatttgtcctagaccaaaccgaatgcgat
atccaagatccgggtcttacagaaattgctctggccgtcaaacaatgggctaggcgagaa
ggactccttccttataatgaaaaatccaaacgggggatgatgaaataccttgtggcaagg
aaatctttttctacaggggaaatcattctggggattgtcactgccaaagaagacctacct
catcccaaagatgcttccaaaagactccacacagccatccagaaccgaattggaaaaaca
ggaaaactaggtaaaattgttggtatcattcataatatcaatacacgacatactaccatg
gctctcggtcgcgaagaacatctgttatggggtagaccttatatccacgaacattttgga
aaacataaattccgtgtgggcctttcaacttttttacaagtaaaccccatacaaactccg
agtttgtacaatttagtattagatgaaatcgaaccggaaagtcgagtgatcgatgcctat
tctggaattggaaccatttccttctggatttctgcaaactgtaaggaagtgatgggaatc
gaagaaaatcctgcttctcatagaactgccctcgaatcaatcaaatacaatcacgtacac
aatgtacgatttcgcaaaggtagagtggccgaagtattaccatctctctatggaaaaaac
tacgacacattggttctcgatcccccaagggttggcctcggtgccgaagtggcagaaacc
attttaggaatgggatttaaaaaaattgtctatgtatcttgtgatcccatgagtttacgc
gaagatacaaatttactcgccagacaatattttttaaattcagtccaaccggtcgatatg
ttcccaagaactgatcatgtagaaacagtagctgtatttagaaataagaatctcacataa
DBGET
integrated database retrieval system
