Listeria monocytogenes HCC23 (serotype 4a): LMHCC_0276
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Entry
LMHCC_0276 CDS
T00801
Symbol
addA
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_0276 (addA)
Enzymes [BR:
lmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMHCC_0276 (addA)
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LMHCC_0276 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
DUF2059
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACK38636
UniProt:
B8DF44
LinkDB
All DBs
Position
278586..282293
Genome browser
AA seq
1235 aa
AA seq
DB search
MSLNIPPKPEESLWTDDQWKAIQAKGNNVLVAAAAGSGKTAVLVTRIIKKLIDESANLNV
DELLIVTFTNASAAEMKFRIGKGLEEALGQNPDSAHLKRQVALLNYASISTLHSFCLEII
RKYYFEADIDPSFRLIEPIESSMIRDEVLEGLLEQEYGIENNEAFFHLVESFTGDRSDAE
LHSLISKLYDFSRANPDPNAWLEAMVNFYNTEEITSITELPYFPIIKEDIELRVNQAKNY
LLNAIDYANENNGPAPYLATLENDLVQIQALSELNWSSWTHLKTSIENIDFKRIPTLKNK
SDYDEVYVEEAKKFRDAAKKEMKNIATDWFSREEVNYLSDLEKMKPDIQTLSELVKKFAA
NFFEEKQQRGVLDFNDLEHLALKILLNGDKASEVAQNYQKQFKEVLIDEYQDTNMVQETI
LRLVTNPSEAQGNLFMVGDVKQSIYRFRLAEPTLFMTKYQTFQQDGSGNGIRIDLSQNFR
SRKEVLDATNFIFRQLMDKHIAEIDYDTAAELTLGAKSPETNAMATELLLIDMKTEDTET
EDELSPQELQKNQVESRTIAMKIREMIDNKFPIYDKKLKQNRPIQYRDIVILSRAMTSAP
DMEEAMKVQDIPFYANNNSGYFETTEVATMIALMKVVDNPYQDIPLAAVLRSPIIGLNEE
ELGQIRMAKKKGYFYDALLAYKDITVSETADKISDFVQQLNNWRELSIRENLTSLIWQIY
QETNFYEFVGGLPGGKQRQANLRALYDRANQYEKTSFRGLFRFVRFVERLEIRGDDLGTA
KTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFNMRDIYSKTLLDKDYGFASSYRDVE
KMIVYPTIMQQAIKQKKSREMIAEEMRVLYVALTRAEEKLILVATVPDFEKTSKNWLQVA
KEKETILPAATRAKAKCYLDWIGNATIRHSAFKELLCEEMIQTLATEMKLQIEIKTKEMF
LTNELERAESDNWLENIKEHQPVPIQSPYKDEIQRYMEYEYQNEAATEIRAKQSVTELKR
QFSLQDNWSDTTLLKEFQKVSLDRPKFLQKNKLSATEIGTAMHTLMQAVSLDYKPTKEDL
EQLLRTMREKDILTDAQIKAINIKQILDFFESPLGETMLQKKDLVKREVPFSYLLPVSEL
YENVDIDERVLIQGVVDSMIEEEETITLIDYKTDKIEGRYADWNAAEKVMKERYHIQIKL
YAEAIQAISGKKVAAAYLYFFDGQHICQINTKEGL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaatataccgccaaaaccagaagagtcattatggacagacgaccaatggaaa
gccattcaagctaaaggcaataatgtacttgttgctgctgctgctggttctggaaaaaca
gctgtcctagtcactagaatcattaaaaagttaatagatgagtcagcaaacttaaatgta
gacgagttactaattgtaacttttacgaatgcttcagctgctgaaatgaagtttagaata
ggaaaaggactggaagaagctctgggacaaaatccagattcagcccatctaaaaagacaa
gtagcattacttaactatgcttctatttcaactctccattctttttgtttagaaattatt
cgaaaatactattttgaggcagatattgatccgagttttcgcttaattgagccaattgaa
agtagtatgattcgcgatgaggttttagaaggattgctggaacaagaatatggtattgaa
aataatgaagctttttttcatttggtagaatcttttacaggggatcgttcggatgcagaa
ttgcactcattaatatctaagctatatgatttctcaagagccaacccagatccaaacgct
tggttagaagcaatggtgaacttttataatacagaagagattacttcgattacagagtta
ccttattttccaattattaaagaagatattgaattaagagtaaatcaagcaaaaaactat
ttactaaacgcaatagattatgcaaatgaaaataacggcccagcaccttatttagctaca
ctagaaaatgatctggtccaaattcaagcattgtcagagttgaactggagtagctggaca
catctgaaaacatctattgaaaacatagatttcaagcgtattccgacacttaaaaataaa
agtgattacgacgaagtatatgtggaggaagcgaagaaatttcgagatgcagctaaaaaa
gaaatgaaaaatatcgcaactgactggttttcgagggaagaagtaaattacttatctgac
ttagaaaaaatgaaaccagatattcaaactttgagtgagttggtcaaaaaatttgctgca
aatttctttgaagaaaaacaacaaagaggggtattagactttaacgatttagaacattta
gcattaaaaattttattaaatggtgataaagcttcagaagttgctcaaaattatcaaaaa
caatttaaagaagtattaatcgatgagtatcaagataccaatatggtgcaagaaactatt
ctgcgccttgtaacgaaccccagtgaagcgcaggggaatctattcatggttggagatgtg
aaacagtccatctatcgctttcgtttagcagagccaacattatttatgacaaagtaccaa
acattccaacaagatggtagtggaaacgggatacgcattgatttgtcacagaactttagg
agtaggaaagaagttttagatgctaccaattttatatttcgtcaattgatggataaacac
attgctgaaattgattatgataccgccgcagaattgactttaggtgcaaaatcccctgaa
acaaacgctatggcaacggaacttttactaattgatatgaagactgaggataccgaaaca
gaagatgaattatcgcctcaagaattgcaaaaaaatcaagtagaatcacgtacgattgca
atgaaaatcagagaaatgatagacaataagtttcctatttatgataaaaaacttaaacaa
aatagacctattcaatacagagatatcgttattttatcaagggcgatgacgagcgctccg
gatatggaagaagcaatgaaagttcaagatatccctttttatgcgaataataactcaggt
tattttgaaacaacagaagtagctacaatgattgcacttatgaaagtagtagataaccct
taccaagatattccacttgctgcggttttacgttcacccataattggcttaaatgaagaa
gagctagggcaaattcgcatggcgaagaagaagggatatttctatgacgcattgctagcc
tataaagacataaccgtttcggaaacagcggataaaattagtgattttgttcaacaatta
aacaattggcgtgaattgtccattcgagaaaatttaacgtctttgatatggcaaatctat
caagaaactaatttttatgaatttgtgggtggtttaccagggggcaaacaacgccaagct
aatttacgagcattatacgaccgggccaaccaatatgaaaaaacatctttccgtggtctg
ttccgttttgtccgttttgttgaacggttagaaattcgaggcgatgatttaggtaccgca
aaaacacttggtgaaaaagaagatgttgttcgcatgatgacaatccatgcgagtaaagga
ttagaatttcctgtggttattgtttctgggctaagtcgaaaatttaatatgcgggatatt
tatagcaaaacgttgttagataaagattatggctttgcatctagttatcgagatgttgag
aaaatgattgtttacccaacaattatgcagcaagcaataaagcaaaagaaatctcgtgaa
atgattgcggaagagatgcgcgtgttgtatgttgcgctaactcgtgcagaagaaaagttg
attttagttgcaacagtaccggattttgaaaaaacaagcaaaaactggttgcaagtcgca
aaagaaaaagaaactattttacctgcagccacaagagcgaaagcgaaatgctatttggat
tggataggaaacgcaacgattaggcattctgcttttaaagaattgttgtgtgaagaaatg
atccaaacacttgcgacggagatgaaactacaaattgaaataaaaacaaaagaaatgttt
ctaactaatgagctagaaagagctgaatcagataattggctggaaaatataaaagaacat
cagccagtacctattcaaagcccatataaggacgaaattcagcgatatatggagtatgag
taccaaaatgaagcggcgactgaaatacgtgctaaacagtctgtaacagagcttaagcgg
caattttctttgcaagataactggagtgatactacactgttaaaagaattccaaaaagta
tcactggatagacccaaatttttacaaaaaaataaactctctgcaacagaaattggtacg
gcaatgcatacgctgatgcaagcagtttcgttagattataaacctacaaaggaagatttg
gaacagcttttacgcacaatgcgagaaaaagatatcttaacagatgcgcaaattaaagca
attaatatcaaacaaatattagatttctttgaatctccattaggggaaacaatgctgcag
aaaaaagatttagtaaaacgtgaagtgccatttagttatttgcttcctgtgtcagagtta
tatgaaaacgttgatatagacgaacgagtactcattcaaggtgttgtggatagcatgata
gaagaggaagaaacgattactttaattgattataaaacagataaaatagaaggaagatat
gctgattggaacgctgctgaaaaagtaatgaaagaacgatatcatattcaaatcaagctt
tatgcagaagcgattcaagcgattagcggtaaaaaagtcgctgcagcttatttatatttc
ttcgatggacaacatatatgccaaataaacacaaaggaaggtctttaa
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