Listeria monocytogenes HCC23 (serotype 4a): LMHCC_0336
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Entry
LMHCC_0336 CDS
T00801
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lmh03110
]
LMHCC_0336 (clpB)
Chaperones and folding catalysts [BR:
lmh03110
]
Heat shock proteins
HSP100
LMHCC_0336 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
ATPase_2
AAA_14
IstB_IS21
TniB
AAA_7
Roc
AAA_28
bpMoxR
NBD_SMAX1
Zeta_toxin
NACHT
DUF815
Torsin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ACK38696
LinkDB
All DBs
Position
337755..340355
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AA seq
866 aa
AA seq
DB search
MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESDFAKRVYDVAEVDIDALQ
KTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQLDDDFVSTEHLILAVMDQK
SNPITMNLKNQHKSKKQIQEAILKIRGGKKVTSQNAEENYEALTKYGRDLVAEVRSGKLD
PVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPEGLKDKTII
SLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNM
LKPMLARGELHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTVSILRGLKERFE
IHHGVNIHDNALVAAASLSNRYITDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRK
VMQLEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIREVREQ
IDHLRHELEEAENNYDLNKAAELRHGKIPAVEKELLELEAENREKTAQEDRILQEEVTEN
EIAEIVGRWTGIPVTKLVEGEREKLLKLADELHQKVIGQDDAVQLVSDAVLRARAGIKDP
KRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYV
GYEEGGQLTEAVRRNPYSIVLLDEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVI
IMTSNIGSNLLLERTEEGEISPELESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKG
IVEKLVEELQIRLADQEITITISDDAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREI
VSGKIMPHSSVEIDLEDKEFTFKVTE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaaaatttacgcaacaagtccagcaaacaattgcggacgctcaaaattta
gcaattgcatccgaacatcaagaaatcgacgtcgctcatgtttttaaagtgttattaaca
gagagtgattttgctaaacgtgtatatgatgtagcagaagtagatatagatgcacttcaa
aaaacagtagaagatgctttaacgaaaatccctgtggtttctggaagcggtgtgaattat
ggtcaagcaatgagccaagcactttttcagttgatgcgggatgccgaaaaagaacaaaaa
caattagacgatgattttgtatcaacagaacatctaatcttagctgtcatggatcaaaaa
tcaaatccaataacaatgaatctaaaaaaccaacataaatctaaaaaacaaattcaagaa
gccattctaaaaatcagaggagggaaaaaagtgacttctcaaaatgcagaagaaaactat
gaagctttaactaaatacggacgtgatttagtcgcggaagtaagaagcggcaaactcgat
ccggtaattggacgagatgcggaaatccgtaatgtcattcggattttatctagaaaaaca
aaaaataatccagttttaataggtgaaccaggcgttggtaaaacagccattgtcgaaggt
ttagcacaacgaatcgttcgaaaagatgttccagaaggattgaaagataaaacgattatt
tcactcgatatcggttcccttattgctggagctaaatatcgcggtgaatttgaagaacgt
ttgaaagcagtacttcaagaagtgaaacaaagtgacggtcaaattttactatttattgat
gaaattcatacgattgtcggcgcaggtaaaacagatggcgcgatggatgccggaaatatg
ttaaaaccgatgcttgcccgcggcgaactacactgtatcggcgcaactacgttagatgaa
taccgtcaatatattgaaaaagatgccgcactcgaaagacgtttccaaaaagtacttgtc
ccagaaccaacagtggaagatacagtttccattttacgtgggttaaaagaacgctttgaa
attcatcatggggtaaatattcatgataatgctttagttgcagcagcgagtctttctaat
cgttatattactgaccgctttttaccggataaagcaattgacttagtagatgaagcttgc
gcaactattcgtgtcgaaattgactcgatgccaagtgaactcgacgaagtaacaagaaaa
gtaatgcaactagaaattgaagaagcggctttaaaagaagaaaaagacccagcgagtgaa
cgccgtttagaaatattgcaacgcgagctggctgactacaaagaagaagccaaccaaatg
aaatcgaaatgggaatctgagaaaaacgaaatcagtaaaattcgtgaggttcgggaacaa
atcgatcatttgcgtcatgaattagaagaagcagaaaataattatgatttaaataaagcg
gcagaattacgacacggcaaaatcccggctgtggaaaaagaattgcttgagttggaagca
gaaaatcgcgaaaaaacagcccaagaagatcggattttacaagaagaagtaacagaaaat
gaaattgcagaaatcgtcggacgttggacaggaattccagtgactaaattagtagaaggt
gaacgcgaaaaactgcttaaattagcagatgaacttcatcaaaaagtaattggtcaagat
gacgctgttcaattagttagtgatgctgtacttcgtgcgcgcgctggtattaaagatccg
aaacgcccaattggctcattcattttcctcgggccaacaggtgttggtaaaacagaactt
gccaaagcacttgcatttaatatgtttgattccgaagatcacatgattcgaattgatatg
tctgaatacatggagaaacattccgtatcaagacttgtcggagctcctccaggctatgtt
ggctatgaagaaggcggtcaacttactgaagcagtaagacgaaacccttattcaattgtc
ctacttgatgaaatcgaaaaagcgcatccagatgtatttaacatacttttacaagtgctt
gatgatggacgtatcacggattcgcaaggccgattaatcgattttaaaaacactgtaatc
attatgacatctaatattggctctaatttactacttgaaagaaccgaagaaggcgagatt
tcaccggaattagaatcagatgtaatgcaaattttacaaagtgaatttaaaccggaattc
ttaaaccgcgtagatgatattattctatttaaaccactaacacttgctgatattaaaggt
attgtggagaaattagtagaagaacttcaaatccgtttagccgatcaagaaattactatc
actatttccgatgatgcaaaagcatttattgcggaagaagcatatgatccggtatacggc
gcacgaccacttaaacgctacattgtacgtcatgttgaaaccccacttgctagagaaatt
gtttcaggtaaaatcatgccacattcatcagtggaaattgatttagaagataaagaattt
acttttaaagtcacagaataa
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