Listeria monocytogenes HCC23 (serotype 4a): LMHCC_0614
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Entry
LMHCC_0614 CDS
T00801
Name
(GenBank) ATP-dependent DNA helicase, recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMHCC_0614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmh03019
]
LMHCC_0614
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_0614
Enzymes [BR:
lmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMHCC_0614
Messenger RNA biogenesis [BR:
lmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LMHCC_0614
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LMHCC_0614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACK38970
LinkDB
All DBs
Position
624714..626117
Genome browser
AA seq
467 aa
AA seq
DB search
MNLEQELKEYLGFDAFRPGQKEVIETALAKRNCFAMLPTGTGKTICYQLAGHLMEGLVLI
VSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKSQILANIHLYKFIFLSPEMLNNEAV
KNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGQFIKEANFPVTMVLTATATKKVRVD
ILTQLHLTDCEQIIYSVNRPNISLQVEKFSSQQLKKERLYELVRKLQTPGIIYFSSKKLA
ESIAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDIICATSAFGMGIDKADIRFV
IHYHMPADLEAYLQEIGRAGRDGKDSVAILLYANGDEFIQMQLADQDIPDANLMNLTNEQ
RKTLPETEQRFIEYYQRSGLSTKELTAKMNYRKKWKRANLQQFIGYLHTEDCRRNYILRY
FEETPIEATPENCCDLDGAEITYFEKREKIQLKEIPTWEAYLSYLLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttagaacaggaattaaaagaatatcttggatttgatgcgtttcgccctggtcaa
aaagaagtaattgaaacagctttggccaaacggaattgtttcgccatgttacctactgga
acgggaaaaaccatttgttatcaattagccggccatttgatggaggggttagttttgatt
gtttcaccgctactttccctcatgcaagaccaaatggagcgaatgcgtgctcacggagaa
aagcgagtggcggcactgaatagctttttaaaacgagaagaaaaaagccaaatccttgcg
aacattcatttatataaatttatttttttatcaccagaaatgctaaataatgaagctgtg
aagaatctattattaaaacaaaaaatcagtttgtttgttatagatgaagcacattgtatt
tcgcagtggggccatgattttcgacctgattatttaatgttaggtcaatttattaaagag
gctaatttcccagtgactatggtgcttactgctacggcgacgaagaaggttagggtggac
attttaacgcaactgcacttaacggattgtgagcaaatcatttattcggtgaatcggccg
aatatttctttacaagtggagaaattttctagccagcagctgaagaaagaacgtttatat
gagcttgtacgcaaactgcaaacgccgggaattatttatttttccagtaaaaaattagca
gaaagtatagcgcatgaattaagcgaaattgccgaattgagggtcgcttattatcacggt
gatatggacacggaagataggattattattcagcaacaatttgtatatggacagttggat
attatatgcgccactagcgcttttgggatgggaatagataaagcagatattcgttttgtg
attcattatcatatgccagctgatttggaagcttatttgcaagaaattggtcgagctggg
cgcgacggcaaggatagtgttgcgattttactttatgcgaatggagatgaattcattcaa
atgcagttagcagatcaagacataccagacgccaatttaatgaacttgacgaatgagcaa
cggaaaacattgccggaaacagagcagcgtttcattgagtattaccaacgaagcggttta
agtacgaaagaattgaccgccaaaatgaattatcgcaaaaaatggaaacgagctaattta
caacaatttatcggctaccttcatacagaagactgccgtcgcaattacattttgcgctac
tttgaagaaacgccaatagaagccacaccagaaaattgttgtgacttggatggggcagaa
ataacctattttgagaaacgagaaaaaatacagctgaaagaaattccaacatgggaagcc
tatctatcctatttactccagtag
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