Listeria monocytogenes HCC23 (serotype 4a): LMHCC_0994
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Entry
LMHCC_0994 CDS
T00801
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03030
DNA replication
lmh03430
Mismatch repair
lmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMHCC_0994
03430 Mismatch repair
LMHCC_0994
03440 Homologous recombination
LMHCC_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmh03032
]
LMHCC_0994
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_0994
Enzymes [BR:
lmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMHCC_0994
DNA replication proteins [BR:
lmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMHCC_0994
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMHCC_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
ACK39342
LinkDB
All DBs
Position
1023851..1027177
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSS
NLIAISPGAKGEIERLLMEENRDGALEAYANLVDIFGKESVYLSAQKENPRLFAKIETFS
AEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQ
TDFEKQACFETGELADRCHVEIALDQHLLPRFPLTEGQNAPDVLRQTAYDGLKERDLLGA
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYNRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSDASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQVENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAE
LKNIQVTPSNELQEALVELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgggttttgttcatttacaagttgcgagtgcttatgatttgctttctagtacagcatca
atcgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtgctttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattattgggatgacggtgacaattcaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcacgagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggaccagaattgccacaaagctggttacgcgcttatagcagt
aacttgattgcgatttcacctggtgccaaaggagaaatcgaacgtcttctgatggaagag
aatcgcgatggagcgctagaggcttacgcaaatttagtcgatatttttggcaaagaatcg
gtttatttatctgcgcaaaaagaaaatccgcgcctttttgcaaaaatagaaacattttct
gcagaagaaaatgtgcctgttgttgcgacaaaaaatgtacaatatttagagccaaaagat
gcacaagcaaaagaagttttaactgccattcgtgataatcgaacggtcgattggacaacg
ttaccacttgctggaccaaattattttacctcacaagaagaaatggaacgtgattggcaa
acggatttcgaaaaacaggcatgctttgaaactggtgaacttgcagaccgttgtcatgtc
gaaattgctttggatcagcatttattacctagatttccattaacggaaggacaaaatgca
ccagatgttttgcgtcagacagcctatgatggcttaaaagaacgagatttactaggggcg
gaatatcaggaacgattagaatatgaattaaaagttattacggagatggggtttgccgat
tactttttaattgtttgggatgttattcgttattcgcgtgaggcgggagttttaacgggg
ccaggtcggggttctgcggctgggtcacttgtttcctatgcactcagaattacggatgta
gatccgattcgatacaatttgctatttgaacgttttttaaacccagaacggattacgatg
cccgatatcgatttggattttccagataatcgtcgtgatgaagtgatttcgtatgtggta
tctaaatacggagaagcgcatgtggcgcaaatcggcacgtttgggacactggcggcaaaa
gcggcgattcgcgatactgcgaggagttttgggttaaattctgtattattatctgaatgg
tctaagttgattccaagtcagttaggtattacgttacaaaaagcattacaagaaagtcca
cgtttagaaaaccatattaaaagctctaaagaaaatgaaatgatttgggaagtagcttgt
caactggaaggcttgccacgtcatatttcaacgcacgcagccggaatagttattagcgac
aagccactcgttgaacaagttgcgctgcaattaggtagcggagatgcacgtttgacccag
tttgctatgggagaattagagaaaatcggcttacttaaaatggactttttaggacttaga
aatcttagtttactcgaccgcgttttaaaatcggttaactataatagagaaacgccgtta
accttagcggatatctctttagaagataaaaaaacattaaaactattccaaacaggcgac
acgacaggtgtattccaatttgaatcggacgggattcgacgcgtactccgaaaattaaaa
ccaacttcttttgaagatgtcgtggcggtggatgcgctttaccgtccaggtccaatggaa
caaattgatacatttatcgctagaaaacacgggaaagaaaaaattcaatatcctcatcca
gatttagcgccgattttggaagtgacatacggcgttatcgtttatcaagagcaaattatt
caagtagcgaaccaaatggctggattttcacttggagaagcagatttattaagacgagcg
gtcagcaagaagaaagcagatgtcctaaacgaggagcgaattcactttgtggaaggtgct
aagagtaaaggttattcagatgctagcgctaaccaagtgtatgatatgattgttcaattc
gcgaattacggtttcaaccgaagtcacgcagcggcttattcaaaaatcgcttttcaatta
gcttatttaaaagcgcattttccagctgcatttatgtcgtcgcttcttagctctgttttt
ggcaatgacgacaaaatttcccagtacattaccgaagcaaaaaactatggcattagcatg
ttagcgccaagcatcaaccatagtaattactacttccaagtggagaatgaatcatctatc
cgctatagtttccgtgttattcgtaaagtcccgacgaaattcattttagaaattattaac
gaacgaaaaaaagcacctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaaccgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagaccgagcgacgattttggcaactattgatgcagtgctacaatatatttcgctactc
ggtgaagactcgaaagggatgaatcttttcgcggaagatgatgactttttgaaaaagatg
aaaccacgctaccggaaaaccgcgcccatttcgattgatgaaaagttggagaaagaaaaa
ttatacactggtcaatatgtttcagcgcatccagtatcgtattatcaaaacaaattacaa
aaccttgcaatcacaagacttgcaaacctttcttctggcaaaaattatcaagtagctgcc
tatgtacacgaagtaaaatcaattagaacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgactccaaagaactgagtgcagtgatgttcccagaaagttaccgtaaattc
gctaattttgcacaaaaaggggaaatcctctttttgcaagtgaaagcagatacgagaaac
ggggaactccagttaattattaataaagcagaagatttaaaagaaataaaagcccccgta
cgattgttcctaaaattaacggaaccacagcaaatggaacaaattaagccagttttaacg
cgttataaaggcgacagtaaggtcattgtgcatcaagcaataacgaaacaaactgctgag
ctgaaaaatattcaagtaacgccatcaaacgagttgcaagaagcgttagtagagctgctt
ggtaaagagaatgtagtcattaagtaa
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