Listeria monocytogenes HCC23 (serotype 4a): LMHCC_1060
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Entry
LMHCC_1060 CDS
T00801
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMHCC_1060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_1060
Enzymes [BR:
lmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMHCC_1060
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMHCC_1060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA_16
UvrD-helicase
AAA_12
AAA_28
SLFN-g3_helicase
nSTAND3
NTPase_1
NPHP3_N
AAA_17
AAA
JIP_LZII
TsaE
ABC_tran
Zeta_toxin
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACK39408
LinkDB
All DBs
Position
1098298..1100694
Genome browser
AA seq
798 aa
AA seq
DB search
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFF
PALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLISYLSGELFKGIGKVTAEN
IVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRENQGLEHVMVGLNEYGFGPQL
SMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFHRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQNILVAQVEKLAEEQKIITENTRVYM
PSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALM
SPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKDGATFPVLLAAPTGRAAKRMS
ESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPAD
FTKNSADRSFFHCTVNQIGDVVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDVLNKKLQ
EIFNPNDTGRRKEVQFGEIKYRVHDKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQD
LIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITE
IDPMIGMEGITPEQFMAG
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaagaatcactcgctctatttaacgatacaccagaagaacttttcatgaag
ggcacgatgttgtccaccattttttacaatgccgaaaacctcttttctgttgtacgaata
ttggtcaaagaaaccaatgcggattgggacgaaaaagatattatcgtaactggctttttc
ccagcgcttcacgagcaagaagtgtacactttctacggaaaaatgcaggaacatgctaaa
tttggtcaacagtttaaagcagaccgatttcgtaaggaaatgccacaatcacgagcgggt
ttaattagttatctatctggtgaactttttaaaggcattggtaaagtcactgctgaaaat
attgtggatacgattggcgacgatgctatcacaaaaattttatccgatccgagcttgcta
aatacagtacctaagttgccatctggcgcggcagaaagtttgcttgcttcccttagagaa
aatcaagggttggagcatgtgatggtcggattaaacgaatatggctttggtccacaatta
tccatgaaaatttttcaggcttataaacaaaatgcgattgaagtattagaaaataacccc
tataaattaattgaagacgtaaaagggattggttttcatcgtgccgacgaacttgggcgg
aaactaggtcttggcgggaatcatccagaacggcttcgtgctgggattttatttatgtta
gattcggtttgtatgcaacaaggtcatgtatatatggagcaagaggttctgctcggagaa
gtaacttatttactggaagaaagcgaaggcattcgtattgaccaaaatattttagtggct
caagtagaaaaattagccgaggaacaaaagattatcacggaaaatacacgtgtttacatg
ccatcgctctattattcagagagcggctttgcatatcacgtgaagcgaatgcttaaacaa
acagaataccaagaacaatttccgcaatctgaatttctgctagctctaggtgaattagaa
gaacggattggagttcactacggagattctcaacgtcaggcgttagaacaagcgttaatg
tctccgatgctcgtacttactggtggtcccggaacagggaaaacaacagttattaaaggg
atagtagagttgtatgcggagctaaatggtgtaagtcttgatccgcatgcctataaagat
ggagcaacgtttcctgtgcttcttgccgctccaacaggtcgcgctgctaaacgaatgtca
gaatcaactggacttccggcgatgactattcaccgtctgcttggaatgaacggtcaggaa
caaatggatgatgatgcagagcggcttattgatggacgactattgattgtagatgagatg
tcgatggttgatatttggcttgctaaccaattatttcgtgctttaccagcgcatatgcaa
gtcgtactcgttggtgaccaagatcaattgccgtctgttggaccaggtcaagtactcaaa
gatattcttcaatcagaacaaattccaaccgtagccctttcagatatttatcgccaaaag
gatggctcatccattatcgaaatggcgcattatataaaagagggaatgttgccagctgat
ttcaccaaaaatagcgccgatcgctcttttttccattgtacggtaaaccaaattggcgat
gtagtcgaacaagtggtgaaaaatgccaaaaacaaaggatttcgagcaaaagatatccaa
gttttagcgccgatgtatcgcggtccagcagggattgacgttttaaataaaaaactacaa
gaaatcttcaatccaaatgataccggtcgtcggaaagaagttcaatttggcgaaataaaa
tatcgcgtgcatgataaagtacttcaattaattaaccaaccggaaaagaatgtgtttaat
ggggacataggtgaaattgtgtctattatctatgcgaaagaaaataccgaaaaacaagat
ttgattgtcgttcaatttgaccaaacagaggtttcttactatagacaagaatttaatcaa
ttgacccatgcttactgttgttcgattcataaagcacagggaagtgaatttccgatagtg
attatgccgattgttcgcagttattaccggatgctacgccgcgatttactttacacaggg
gtaacgaggagtaaacagtttcttattctttgcggggaagaagaagcatttcgaatgggg
atagaacgaattgatgaaaataagcgcaatacaacactctctgaacgtttaatgagcgaa
gatgtattattagagcaaatgacgaataaacgaattcttactgctgaaaatattactgaa
atagatccgatgattggaatggaagggattacgccagaacaatttatggcaggatga
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