Listeria monocytogenes HCC23 (serotype 4a): LMHCC_1209
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Entry
LMHCC_1209 CDS
T00801
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LMHCC_1209 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_1209 (xseB)
Enzymes [BR:
lmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LMHCC_1209 (xseB)
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LMHCC_1209 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Paralemmin
DUF4200
HAUS-augmin3
DUF3496
Prefoldin
Motif
Other DBs
NCBI-ProteinID:
ACK39556
UniProt:
B8DFW6
LinkDB
All DBs
Position
complement(1254217..1254444)
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AA seq
75 aa
AA seq
DB search
MATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKV
VTDAGEEIPFEADGE
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
gtggcaactaaaaagaaaacttttgaagaagcaatagcagaattagaaacaatcgtagaa
gcgctcgaaaatggtagcgcctcactcgaagattctctcgatatgtatcaaaaaggaatc
gaactaactaaattgtgccaagataaattacaatcagccgaaaaacgaatggcaaaagta
gtcacagatgcaggagaagaaattccttttgaagcggatggtgaataa
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