Listeria monocytogenes HCC23 (serotype 4a): LMHCC_1250
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Entry
LMHCC_1250 CDS
T00801
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Pathway
lmh03030
DNA replication
lmh03430
Mismatch repair
lmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMHCC_1250 (polC)
03430 Mismatch repair
LMHCC_1250 (polC)
03440 Homologous recombination
LMHCC_1250 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmh03032
]
LMHCC_1250 (polC)
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_1250 (polC)
Enzymes [BR:
lmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMHCC_1250 (polC)
DNA replication proteins [BR:
lmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMHCC_1250 (polC)
DNA repair and recombination proteins [BR:
lmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMHCC_1250 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
Rv2179c-like
RNase_H_2
DEDDh_C
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
ACK39597
LinkDB
All DBs
Position
complement(1288875..1293206)
Genome browser
AA seq
1443 aa
AA seq
DB search
MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKKNKTWQFHLHVPQIFPA
ALFHMMDVGMKRAFSQIAETEMQIVPENQTINEALIQDYWNLIVEPIGKQSPMIGKLLME
QKPTFKEPHFIELAVHNDMEEATIQQRFQAKIIESYGKAGFPRLAMKMHMLDQSETEEYK
AFAQAKQEEDQKKAAEAVQVMQKRQAEGQSGGGAAPLTGPFQIGYKIKDDEEVKRLGDIY
DEERRITVQGLIFATEIRELRSGRSLLQFKITDYTSSMIIKMFSRDNEDAAMFQNLKKGM
WVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRLDTAEEKRAELHLHSPMSQMDATSSVDS
LFKQAADWGHKAIAITDHSVAQSFPEAYGAGQKYGLKVIFGIEANLIDDGVPIAYNDQHI
ALQDATYCVFDVETTGLSAVYDTIIELAGVKMKNGEIIDKFEAFIDPGHPLSATTINLTG
ITDDMVKGSDPIDVVLKRFKEWSGDDILVAHNASFDMGFINTAYEKVGLEKAENAVVDTL
ELARFLYPHFKNHRLNTLTKKFNIILEQHHRAVFDAEATAYLAWKLIKDAKEMHDIDFHD
SLNDYMGEGDAYKRARPFHATIYAQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKLR
EGLIIGTACSQGELFEAMMQKGMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKALE
EILKNIVRVGEKTGKPVVATGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRTT
DEMLKEFAFLGEEKAKEIVVTNSNLVVDWMEDLKPIKDELYTPKIDGAEDEVRNMSYEMA
HQLYGENLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFV
ATMTEITEVNPLPPHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTAYQKEGQDIPFE
TFLGFKGDKVPDIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNYE
RDMNMTIRGAEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEWK
TTHFDFHSIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLGV
KPADIDSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIKN
KTCELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTDEMEEAMMANKVPLWYI
ESCKKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLFFYATYFTVRADDFDLTSMVNGKEAV
KATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFLIDGDSLIP
PFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLPDQNQL
SLF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaagaggaagaaaaacaagaacgatttcagctgttaatgacacaaatcggt
ttacaagatgtaacaacttacgaagaatttacaaaagatgccaaaatcgaaaaactcgtt
gccgataagaaaaataaaacatggcaatttcatttacatgttccacaaatttttccagca
gcacttttccatatgatggatgttgggatgaagcgcgcattcagccaaattgcggaaaca
gaaatgcaaatagttccagaaaatcaaacaatcaatgaagcactcattcaagattattgg
aaccttattgtagagccgattggaaagcagtcaccgatgattggaaaacttttgatggag
caaaaacctacatttaaagaacctcattttattgagttagcggttcataatgatatggaa
gaagcaacaatccaacaacgattccaagcaaaaattattgaaagttatgggaaagctggt
tttccgcgcttggcaatgaaaatgcatatgctagatcaatctgagacagaagaatacaaa
gcttttgcacaagccaaacaagaagaagatcagaaaaaagctgcagaagctgttcaagtt
atgcaaaaacgacaagcagaaggacaaagtggcggtggagcagctccattaactggtccg
ttccaaattggttacaaaattaaagatgatgaagaagtgaagcgtcttggtgatatttac
gatgaagaacgtcgtattaccgttcaaggcctaatcttcgcgacggaaattagagagcta
cgcagtggtcgtagtttattacaattcaaaattaccgactatactagttcgatgattata
aaaatgttttctcgtgataatgaagatgcagcaatgttccagaacttaaaaaaaggtatg
tgggttaaagtacgaggaagtgttcaaaatgatactttcgttcgagatttaattatgatg
gcccaagatgtgaatgaaattgcaggagtaaaacgcctcgatacggcggaagaaaaacga
gcagaactacatctccattctccaatgagtcaaatggatgctacttcatctgttgattct
ctgttcaaacaagctgctgattgggggcacaaagcaattgctattaccgaccactctgtt
gcgcaatctttcccagaagcatatggggcaggtcaaaagtatggcttgaaagttattttt
ggtatcgaagccaatctaatagatgatggtgttccaatcgcttataacgatcaacatatc
gccttgcaagatgcaacatattgcgtatttgacgttgagacaacaggtttgtccgcggtt
tatgatacgattatcgagcttgctggtgtaaaaatgaaaaacggtgagattattgataaa
tttgaagcctttattgatcctggacacccgctttctgcaactaccattaatctaactggt
attacagatgatatggtcaaaggttctgatcctattgatgttgttttaaaacgatttaaa
gaatggagcggcgatgatattcttgtggctcacaacgcttcatttgacatgggctttatt
aacactgcttatgaaaaagttgggctagaaaaggcagaaaatgcggttgtcgatacattg
gaattagctcgttttctttacccacattttaaaaatcatcgcttgaataccttaaccaag
aaattcaatattattcttgaacaacatcaccgagctgtttttgatgcggaagctacagca
tatttggcttggaagttaattaaagatgcaaaagaaatgcacgatattgatttccatgat
tctctaaatgattatatgggagaaggcgatgcatacaaacgtgcgcgaccattccatgcg
acgatttatgcacaaacagctgttggtttgaagaatcttttcaaattaattacgatgtcc
aatattaattacttttaccgggtgccacgtattcctcgctcgcagctaaagaaattacgc
gaaggtttaataattggaactgcttgtagccaaggagaactatttgaagcaatgatgcaa
aaagggatgcaagcggcagaaaaggttgcggagttctatgatttcattgaagttcaaccg
aagccagtctatgcgccactgattgagcgggaacttgttcgtgatgaaaaagcgttagaa
gaaatcttgaaaaacattgttcgtgttggtgagaaaactggaaaacccgttgttgcaacc
ggtaacgttcattacaaagacccagtggataaaatttatcgtaaaatcttgattcattcg
caaggtggagccaaccctctaaatcgtgctgaattaccagatgtccatttccgtacaaca
gatgaaatgttgaaagaattcgctttcctcggtgaagaaaaagcaaaagaaattgttgta
acgaattcgaatttagtggtcgattggatggaagatcttaaaccaatcaaagacgaatta
tacacaccgaagattgatggcgcagaagatgaagttcgtaatatgagttatgaaatggca
caccaattgtacggtgagaatttaccagaaattgttgaagctcgacttgaaaaagaactg
aaaagtattattggccacggatttgcggttatttatcttatctcacataaacttgttaag
aaatcgcttgtggacggctatctcgtaggttcgcggggatcggtcggttcttctttcgtt
gctacaatgacggaaattaccgaagtaaacccacttccaccacattatctttgcccgaat
tgtaaggattcagagttctttgatgatggttcggttggttccggttttgacttacctgat
aaagattgcccacactgcggaaccgcttatcaaaaagaaggacaagatattcctttcgaa
actttcttaggatttaaaggggataaagtacccgatattgacttgaacttctcaggagat
tatcaaccggtagcccatgcgtatacaaaagaaatttttggtgaggattacgttttccgt
gcaggtacgattggtactgttgcagagaaaaccgcttttggttatgttcgaaattatgag
cgcgatatgaatatgactattcgcggggcagaaattgatcgcctagtagccggttgtaca
ggcgttaaacgtactactgggcagcatccaggtggtattatcgttattcctgattatatg
gatgtatacgattttacaccggtacagttcccagcagatgcgacggattcggaatggaaa
acgacccattttgacttccactcgattcatgataacgtgttaaaactcgatatacttgga
cacgatgatccgactgctatccggatgttacaggatttaagcggtatcgatccaaaaaca
attccaaccgatgatccagatgtaatgaaactttttggatcgactgagtcacttggtgtt
aaaccagcagacattgattccaaaacagggacgctcggaattcccgaatttgggacgcgt
ttcgtacgacaaatgttagaacaaacaaagccaacaacattttctgagctagtccaaatc
tctggtctttcccacgggacggacgtttggcttggaaatgcagaagaattaatcaaaaat
aaaacctgcgaactgccagatgtaattggttgtcgtgatgatattatggttttcctaatt
taccaaggactcgaaagctcattagcctttaaaattatggagtctgtacgtaaaggtaaa
gggctaacagatgaaatggaagaagcgatgatggcgaataaagtgccgctttggtacatt
gaatcatgtaaaaaaatcaagtacatgttcccgaaagcccatgctgcagcctatgtttta
atggcagtccggattgcttatttcaaagtgcatcatccactatttttctatgcaacttat
ttcaccgttcgtgccgatgatttcgatttaacatcgatggtaaacggaaaagaagctgtg
aaagcaaccatgaaagaagtaaatgataaaggaatggaagcttcgacgaaagagaaaaac
ttattaaccgttttagaaattgcgaatgaaatgcttgctcgtggtttccatttccaaaaa
gtcgatttatacaaatcgtctgcagatgaattcctgattgacggagactcactcattccg
ccatttaatgcgattccaagtcttggaacaaacgtagcgaaacaaatcgttgctgcacgt
gaaaatggtgaatttttatccaaagaagacttacaacaacgcggaaaagtatcaaaaaca
atcattcagtacatggatgatcaaggatgcttggaaggattgcctgatcaaaatcagttg
tcactattctaa
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