Listeria monocytogenes HCC23 (serotype 4a): LMHCC_2043
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Entry
LMHCC_2043 CDS
T00801
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
Brite
KEGG Orthology (KO) [BR:
lmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmh03400
]
LMHCC_2043
Enzymes [BR:
lmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMHCC_2043
DNA repair and recombination proteins [BR:
lmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMHCC_2043
Prokaryotic type
LMHCC_2043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACK40382
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Position
complement(2017318..2018721)
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AA seq
467 aa
AA seq
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MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNPAQFITGSPSHQAFFASVAHFKQEI
DKTAHVQIMFGEPIECFQQLKDTLPSWDKVYFNRDETGYGAKRDEAAQAFFDEQKIEVQS
FHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFKVTLKPENIRKESLFPKYEEQ
FAEMTCDLPILDSGERAANTRLANFIKHDIADYDKARDFPELDKTSHLSRYLRTGEISIR
TVWQALQETKATEGRATFEKELCWRDFYNMIYVSFPNQKNEPIQENYRFIEWENNREFFK
AWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITASFLTKDLLIDWRFGEKYFQQMLIDYD
PASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTAKFIRKYVKELANLPDKYIHQPE
KMSETEQKEYGLVLGKDYPFPLIDHKERRKLAIARYEFSKEHSRGNI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggtaatgtggtttcggagagatcttcgagtaaatgataataaagccctctat
catgcctgtaaagaggacgatttgcttttgttatttcaagtaaatccagcacagttcatc
acaggaagtcctagccaccaagctttttttgctagtgtggctcattttaagcaagaaatc
gataaaactgcacatgtacaaatcatgtttggtgaaccgatagaatgcttccaacaatta
aaagatacgctaccaagctgggataaagtttatttcaaccgtgatgaaacaggatacgga
gcaaagcgggacgaggcggcgcaagctttctttgacgaacaaaaaatcgaggttcaatcc
ttccacgacagctatcttcattcagcggaagaagtaaagaaatctcccacagaatactat
aaaatttttaccccttactataaaaaatggcgcgaagaaataaaagaaacaccgttcaaa
gtgactttaaagccagagaatatccggaaagaaagtttgtttccgaaatacgaagaacag
tttgcggaaatgacttgcgatttgccgatattagattctggtgaacgagcagcgaatacg
agacttgcgaattttattaaacacgatattgctgactatgacaaagcgagagatttccca
gaactggataaaacaagtcatttatcacgttatttacggacgggagaaatctcgattcgg
acggtttggcaggcacttcaagaaacaaaagcaacagaaggacgagctacatttgaaaaa
gaactttgttggcgcgacttttataatatgatttacgtttcttttcctaaccaaaaaaac
gagcctatccaagaaaattatcgttttattgaatgggaaaacaaccgcgaatttttcaaa
gcgtggcaagaagggaagactggtttcccgctcgttgatgcagcgatgcgccagctgaaa
gaaactggttggatgcataatcgactaagaatgattacagcgtcctttttaacaaaagat
ttgctgattgattggcgttttggcgaaaaatattttcaacaaatgctgattgattatgat
cctgcgagtaatattggtggctggcaatgggcggcttcgactggaacagatgcggtgcca
tactttaggattttcaacccaacgacacaatcacaaaaatttgatccaactgcgaaattt
attcgaaaatatgtaaaagagttagcgaatctacctgataaatatattcatcaacctgaa
aaaatgtcagaaacagagcagaaagagtatggtttggtattaggaaaagactatccattc
cctttaattgaccataaagaacggcgtaaattagccattgcacgctacgagtttagcaaa
gagcattctaggggaaatatatag
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