Listeria monocytogenes HCC23 (serotype 4a): LMHCC_2776
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Entry
LMHCC_2776 CDS
T00801
Name
(GenBank) YD repeat protein
Organism
lmh
Listeria monocytogenes HCC23 (serotype 4a)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
ApoLp-III
Apolipoprotein
DUF842
COG5_N
Baculo_PEP_C
ApoO
Mus7
Motif
Other DBs
NCBI-ProteinID:
ACK41110
LinkDB
All DBs
Position
2769137..2775805
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AA seq
2222 aa
AA seq
DB search
MNKNGAREFEIVDSKTGKISLFAANGLLLKVTSKDGNATNYTYNADGELVKMITGSGKIL
QYTWDADGHLKEIVLPDGGKLAYSYDDDGNLTKLVDQTGKAITYQYDSEHHMTSYKDHNG
KLLIKNTFDADGRVTEQTDGEGNTATLKYEKGKTTTTDFNGNKKVVYFNERFQTTKTEYA
DDTTTENKYGDKHQLVASIDQLGNTTTFENDANGNLTKTVYPDGTTETNEFDAKNQLIRV
TDSRGGVTSYTYDSKGNVVQITEPNGGVKKFTHNADGQVVTETDANGAVTKTAYDAKGNP
TKVTDGRGNETTYAYDNLSMLSSITDANGKSEKYERNARGELVREWNANGAATKYSYDSN
GNKTSETDENGNSTTFEYDAFGRLSEETNPLGGVTKYKYDGNGNKISETDPLGNTEEFKY
DSQNRMIEAIAADGSVITYRYDALGQKLSEETEDGQKTSYLYDAKSGYKTQETDPLGNKT
SYAYDADGNVTKITYPDETTEEFSYDAMDNITRFVDQAGNVQTYEFDANGNTTKLKEAGR
VSTYSYDENGSVTSEQDAAGGVKRYSFDKVDQVEIETDELGEKTHYVYDADGNVTKITDG
NGHTITMAYDNAGNVIRQTDAEGNTTKYTYNALHLVETEISPTNDITQYRYNKNGDLIKE
IDPYNNETSYRYTKTGEVSKIIDALGNETTYDYDNRGNLTTSTDPLGRKTTYSYDKADRV
IEQKNPDGTKATYTYDKMDRLLEQQDNTGQKESYKYNATGDVTRVADRKGRTESYTYDTF
GNVSSKTDMRGNKTSYEYDAANRLVKQQNPTGKAQSIDYNKRGDITSEVLPNTGKYTYNY
DAEGNLLSETNPLGETTSYQYNGNDELITTTNPAGAKSSVTYDANGNVTAVTDENGGITK
QTFDATGLITSQTDAEGNKTQFGYDQLGRLTTEIDAAGFKLLNSYDAAGRLITETDKRGN
TTKYTYDNADNILTVKEPYGTTSTFKYDLRGNVTKEIDAKGNATTYSYDKDDQLLSETDP
IGYKQSYKYNEYGDLIEESDNQQKKAIASYTYDKLGQQTTKKDIQGRITRYTYDDTQRMT
QITYPNKLAVGYTYDKLDRVTTMRDVRGNDTKIQYDKVGNVTSMIDPGNQVYKYTYDKKG
NMTKEIDPLAASTEYRYNKNDQVISIKDPTNAITKYQYDARNLLTSITDAKGHTTKMAYD
GNENLSETTDAKGNKERFEYDALDRMTAAQNRLGQKSTYTYDKVDNVTEIKDAKGFVTKY
SYNDRSDLVKEVTPEGKTEKYEYQLDGSLKSKTKPDGEKTTFKYDELNNLVEQQFDGGSY
KYTYDSNDDVKTATSKDGTSKFTYNKFGDVLSVKDANGETLKYEYDTIGRKTALIYPDNT
RVSYRYNDANLLTDVIESDGKKTSYTYDANGLPLSIHYSNGTTTSYKYTATGETEQVITK
NKAGETIASFDYNYDENGNVAKETINQSGEKQTKSHTYDADDQLMETTITKGKTTEKITY
IYDANGNRSKLLRNKNGKKTTENYHYDDDNALTMIKADGDKDTTYTYDKNGNITKKALRS
GKVETYTYNGENQLIQSADNEGNQTTYTYDAFGNRIGKQTITDKTKSFKGSLSEWITEYD
KDSQKGKTETLAAQLETRANETSKGCSAYAEASTQKVTKDGMQGKTELKGSDSSGSKTSQ
RTTKMTQTVGYQTVNTIRYVNDLTQEYTQVAQLNETTEDDGETSTTKTAFRFGDDNQIIG
TEEESYHENGLTDITTTTDGETSTDYDYTDYGTALATAPVANQIGYRAQMHDTSDTQNLR
ARNYDTNTGRFQQVDSYRGSLDDPRSQNRYIYGVNNPMSFGDPSGNIPKWLKKATKKVKK
AAKKVSKGIKKAKKVIKKTVKKVKRAVKKVKKAIKKTTKKIKRAVKKVTKKVQKTVTKFK
KAAKKSIKQARKTVKKVYKKAKQTVVKKVNKIKKTTKKVVKTVKKAGTKVINKATSKIKT
VGKKANAIIAAGKEAAAKAKKEKADRKAAAKEALCKNQEFLESQKKGYSDPTYDYKAGYP
RPDEAWAFDANGNIDKEKSAEVSEKIGEWSTYALMLVIPGPEELLITGILVKVGGKVGPK
IISWGANKFGAKGAAKTATKEASEIIIPKATDLKNSNTVQKHIEEIVKKGANKGQLSRPY
IDTDGTTLLLDEIMNAASPVKDRVLSNGLRWDVEGVFRNSKGTWELVVDMSTNTIVHFNF
VN
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaacggcgcgcgtgaatttgagattgtagattcaaaaacaggcaaaatctct
ctttttgctgcaaacggtctgcttttaaaagtgacaagtaaggatggaaatgcaacgaac
tatacgtacaatgcagatggtgaattggtgaaaatgatcactggctccgggaagatattg
cagtatacgtgggatgcagatgggcatttgaaagagattgtgttgcctgatggcgggaaa
ttggcttattcatatgatgacgatggaaatctgacaaaactagtggatcaaactggaaaa
gcaattacatatcagtatgattcggaacaccatatgacatcgtataaagaccataacgga
aaattattgattaagaatacatttgatgcggacggtcgtgtgacggaacaaacggacgga
gaaggcaatactgccacactgaaatatgagaaaggtaaaacaacgacaacagacttcaac
ggtaataagaaggtggtttattttaatgagcgcttccaaaccacgaagacggagtatgcc
gacgatacaacgactgaaaataaatatggcgacaaacatcaattagtcgcttctatcgac
caattgggaaatacgacaacctttgaaaatgatgcaaacggaaatctgacaaaaaccgta
tatccagatgggacaacagaaacgaacgaatttgacgcgaaaaatcaattgatacgcgtg
acggatagccgtggaggcgtaacgagctatacctatgattctaaaggaaatgtcgtacaa
ataacggagccaaacggtggtgtgaagaaatttacacataatgcagatggtcaggtggtt
acagagactgatgcaaatggcgcggtaacaaagaccgcttatgatgcgaaaggaaatccg
acaaaagtaacggatggccgtggcaatgagacaacatacgcctatgataatttgtcgatg
ttgagtagtattactgatgcaaatggtaagtcggaaaaatatgaacgaaacgcgcgcggt
gaactagtgcgcgaatggaatgcaaatggagcagcaacaaaatattcctatgattccaat
ggtaataagacaagtgaaaccgatgagaatgggaatagcactacttttgaatatgatgct
tttggtcgtttgagtgaggaaacgaatccactaggcggcgttacaaagtataaatatgac
ggaaatggcaataaaattagcgaaacagatccactcggtaacacagaggaatttaagtat
gactcgcaaaatcggatgatagaagcgattgcggcagacggctcggtcattacatatcgt
tatgatgcacttggtcaaaaattatccgaagaaaccgaagatggtcaaaaaacaagctat
ctatatgatgcaaaatcaggctataagacacaagaaacagatccactcggcaacaagaca
agctatgcctatgatgcagacggaaatgtcacgaaaatcacttatccagacgagacaaca
gaagagtttagctatgatgcaatggacaatattacacgttttgtcgatcaagctggcaac
gttcagacgtatgaatttgatgcgaacggaaacacaacaaaattaaaagaagctggccgt
gtttcgacatatagctacgatgaaaatggtagtgtaacctcagaacaagacgcagctggc
ggcgtaaagcgctatagttttgataaagttgatcaagtagaaatcgaaaccgacgagctt
ggcgaaaaaacacactatgtgtacgacgcagacggaaatgtcacgaaaatcacggacggt
aatggtcatactataacaatggcgtatgataatgctggtaatgtgattcgccaaacggac
gcagaaggtaataccacaaaatatacctataatgcgctccatttagtcgaaacggaaatt
tcaccaacaaacgatatcactcaatatcgctataacaaaaacggagatttaattaaagaa
atcgatccatacaacaacgaaacaagctatcgttacacaaaaacgggcgaagtgtctaaa
atcattgatgccctaggtaacgaaacaacgtatgattacgataatcgtggcaatttgaca
acaagtactgatccactcggtcgaaaaacaacctacagttacgataaggcggaccgtgtc
atcgaacaaaaaaatccagatggcacaaaagcaacgtatacttatgacaaaatggacaga
ctgctagaacaacaagacaatacaggtcaaaaagagagctacaaatacaacgcaactggt
gacgtaacccgtgttgctgatcgtaaaggtcgcactgaatcctacacctatgacacattt
ggcaatgtcagcagtaaaaccgatatgcgaggcaataaaacaagctacgaatatgatgca
gccaaccgcttagtgaagcaacaaaacccaacaggcaaggcgcaaagcattgactacaac
aaacgtggcgatattacctcagaagttttaccaaatactgggaaatacacttataattat
gatgcagaaggtaacttgttgtcagaaacaaacccgctaggcgaaacaacaagctatcaa
tacaacggcaacgacgagctgattacgacaacgaatccagcaggcgctaaatctagcgtc
acttacgatgcaaatggcaacgttacagcagttaccgatgaaaacggcggcataacaaaa
caaacttttgacgcaacaggtttaattacaagtcagacggatgcagaaggaaataaaaca
caattcggctatgaccaattaggacgcctaacaactgaaatagatgctgcaggattcaaa
cttctgaacagctatgacgcagcgggacgccttatcaccgaaacagataagcgcggaaac
acgacgaaatacacgtacgacaacgcagataacattttgacagtcaaagagccttatggt
accacatcgacgtttaaatacgacctacgtggcaatgtgaccaaagaaatagatgcaaag
ggcaatgcgaccacttatagctacgataaagacgatcaacttttatctgaaacggacccg
attggttataaacaaagctacaaatataacgaatacggcgaccttattgaagaaagtgat
aatcagcagaaaaaggcgattgccagctatacgtatgacaaattgggtcagcaaacgacg
aaaaaagatattcaaggtcgaatcacgcgctacacatatgacgatacccagcgcatgacg
caaattacgtatccaaataaacttgcggtcggctatacgtacgataaactagaccgtgtt
actacaatgcgagatgttcgtggcaatgatactaaaattcagtatgacaaagtcggcaac
gttacctccatgattgatccaggtaaccaagtctacaaatacacctacgacaaaaaaggc
aacatgaccaaagaaatcgacccactcgcagcaagcacagagtatcgttacaataaaaac
gaccaagttatcagcatcaaagacccaacaaacgcaataactaaataccaatatgatgcg
cgtaacctgctaacttctataacagatgccaaaggtcacacaacaaaaatggcctacgat
ggcaacgagaatcttagcgaaacaacagacgcaaaaggcaacaaagaacgcttcgaatac
gacgcactagatcgcatgacagcggcacaaaaccgattaggacaaaaatcaacttacact
tacgacaaagtagataacgtcacggaaatcaaagacgccaaaggttttgtcacaaaatat
agctacaacgatcgcagtgacctcgtcaaagaagtaacaccagaaggcaaaaccgaaaaa
tacgaataccaattagatggttctttaaagtctaaaacgaagccagatggtgaaaaaaca
actttcaaatacgatgaattaaacaatttagtcgagcaacaatttgatggtggcagctac
aaatacacgtatgacagtaatgacgacgtaaaaaccgccacatcaaaagacggaacatcc
aagtttacctacaataaattcggtgacgtactatcagtcaaagatgcaaacggcgaaacg
ttgaaatacgaatatgatacaatcggccgcaaaaccgcgctcatttatccagataacacg
cgtgtatcttaccgctacaatgacgccaacttactaaccgatgtcatcgaatcagacggc
aagaaaacgagctacacatacgacgcgaacggtctgccactgagcattcattacagcaat
ggcacaacgactagctataaatacacagcaactggcgaaaccgagcaagtcatcaccaaa
aataaagccggagaaaccatcgcgtcatttgactacaactacgacgaaaacggtaacgta
gccaaagaaaccatcaatcaaagtggcgaaaaacaaaccaagagccacacctatgatgcc
gatgatcagctgatggaaacaacaataaccaaaggaaaaaccaccgaaaaaattacgtat
atctatgatgctaacggcaaccgaagtaaacttttacgtaataaaaacggtaagaaaacc
acggaaaactatcattacgacgatgacaacgcgctcaccatgattaaagcagatggtgat
aaagacacaacctacacgtatgacaaaaacggtaacattaccaaaaaagccttacgaagt
ggtaaagtagaaacatacacatacaatggcgaaaaccaactgattcaatccgccgacaac
gaaggaaaccagacgacatacacatatgacgcatttggtaatcgcataggcaaacaaacc
atcacagacaaaaccaagtccttcaaaggctcgctcagtgaatggattacagaatacgac
aaggatagtcaaaaaggcaaaacagaaacactagcggcacaattagaaactcgcgccaat
gaaacttctaaaggttgctcagcgtatgcagaagcaagtacgcaaaaagtgactaaagat
ggcatgcaagggaaaaccgagcttaaaggaagcgatagcagcggaagcaaaaccagtcag
cgcaccacaaaaatgacccaaacagttggctatcaaactgtaaataccattcgctatgtc
aacgatttaacgcaagaatacacccaagtcgctcagcttaacgagacgacagaagacgac
ggcgaaacaagcactaccaagaccgctttccgttttggtgacgacaatcaaataattggc
accgaagaagaaagctatcatgaaaacggcctaaccgacatcacaacaacaactgacggt
gaaacaagtactgactatgattacacagactatggtaccgcacttgcaacagctccagtt
gcgaatcaaatcggttatcgcgcgcaaatgcacgacacaagcgacacacaaaacctgcgt
gcccgaaattatgatacaaacactggtcgtttccaacaagtcgatagctacagaggatcc
ctagacgacccacgtagccaaaaccgctacatctacggcgtcaataacccaatgtcattc
ggcgacccaagcggaaacataccaaaatggcttaaaaaagcaaccaaaaaagtcaaaaaa
gccgcgaaaaaagtaagcaaaggcatcaaaaaagccaaaaaagtcatcaaaaaaaccgtc
aaaaaagtaaaacgcgccgtgaaaaaagtcaaaaaagccatcaagaaaaccaccaaaaaa
atcaagcgcgccgtcaaaaaagtaacaaaaaaagtccaaaaaacagtgacgaaattcaag
aaggcagctaagaaatcgattaaacaagctcgaaaaacagtcaagaaggtctataaaaaa
gccaaacagactgtcgtgaaaaaagtaaataaaatcaagaaaactactaaaaaagttgtt
aaaacagtcaaaaaagccggaaccaaagtaataaataaagctactagcaaaatcaaaaca
gtcggcaaaaaagccaatgcaataatagccgcaggtaaagaagcggcagctaaagcaaaa
aaagaaaaagctgatcgaaaagccgcagccaaagaagccttatgtaaaaaccaagaattc
ttagaaagtcaaaagaaaggctatagcgatccaacctacgactacaaagcgggctatcca
agaccggatgaagcgtgggccttcgatgctaacggaaatattgataaggaaaaaagcgca
gaagtttctgagaaaataggtgaatggagcacttatgcacttatgctggtcataccgggt
ccagaagaactattaattactggaattttagtcaaagttggagggaaagttggtccaaaa
ataatttcttggggagcgaataagttcggagctaaaggagcagctaagactgcaactaag
gaagctagcgaaattatcattccaaaagcaactgatttgaaaaatagtaatacagttcaa
aagcatatagaggaaattgttaagaaaggtgctaataagggtcagctatcaaggccttat
attgatacggatgggacaactttacttttagacgagataatgaatgcagcttcccctgtg
aaagacagggtgttatcaaatggccttcgatgggatgtggaaggggtatttagaaattct
aaaggtacatgggaactagtcgttgatatgtcaacaaatacaatcgttcattttaatttt
gtaaattaa
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