Leishmania mexicana: LMXM_04_0550
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Entry
LMXM_04_0550 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K19673
tetratricopeptide repeat protein 21B
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmi03037
]
LMXM_04_0550
Cilium and associated proteins [BR:
lmi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
LMXM_04_0550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
TPR_19
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
TPR_2
TPR_16
TPR_14
TPR_1
TPR_8
ARM_TT21_4th
TPR_CcmH_CycH
CFAP70_TPR_C
TPR_7
TPR_12
TPR_6
TPR_Psidin_N
TPR_4
RMD1-3
CFAP70_mid_TPR
TTC22_N
ANAPC3
TPR_15
ChAPs
TPR_Slam
TPR_MalT
Iml2-TPR_39
Wzy_C_2
TPR_21
Motif
Other DBs
NCBI-GeneID:
13452952
NCBI-ProteinID:
XP_003871822
UniProt:
E9AK37
LinkDB
All DBs
Position
4:complement(<205352..>209992)
Genome browser
AA seq
1546 aa
AA seq
DB search
MTATILRTNYALLLFYVREKYWHHAEEVCLSVIQSTDDHMFRVWRALTLDRQGMANDAIR
EYKTVESRRATAVPALMGMQLIYKHNRDQEGVAQTEAKLDAFEVADNMGAWVQAAALCWA
AGDINAARDILLKFADNEAAMAYRDEYTNYGTIRGWVDLLSGRGALLEKAGALFSSMLEM
EASQYSFFQAGNEAGGGGGGGANKWTDMNAALGYVAFLEHKTQLTKAQSLLDRLVVLYPN
CSIPPLVGKARLLMQAEDWEQAIEVIHRILAHDKGNVEALALEALYAIGKDTRQDAAPVR
VRRLLDAVRAKEPRNVTLLHQFALVFSRLAGDRLDLLNITTQFSEMACALDSRNGDVLCG
LGYQQLYRRDYKTATATFRKAATLTDSLDPLLGTVTCLLHQGDLEEAATQLKFCNELQPA
SQRNAELSLLNAQLRWRRRGLEEETAVLRYLDQAAEAIRQDVKEHAGSGMEMYVHLNAPV
ALAIAHAYLMHCPNEPPDPMFKHTDVVGEKCGRHLAFIVQHLPACMEAQLMLAKVWFITG
DVRKAQNLLKNSLLMQEQPLPDAFLLSSHICQYMGDVKLASQALEQALTLDFSLQEQPLY
NLLLGTVQGTTGKYAEALASLQRAYGIVKSAAAATSAGKPTDPLSVPETVTLYLQLAQAQ
LRVRDVDAARATLAEAALKFRDSAQMGRVIIAQAMLAARTDVDKSIELLRQVPSKSEFYI
AAHSQLGKLFLTQKHNLGMYIQCFQEMAEAVPSAQSYVALGEAYTVIQEPEQAIAAYEKA
RALSPSSSELSVRVGRALVAAHDYAKAIRYYQDALISDPHLSIVRADLATLQWRLGRIDA
ARETIMMSPVYELPSPNGAGAGAASAAAAGSAETVGTGIERVNLYLLLYKVLRDQPWTVP
LSAQGTADTGSDGDHGDTALAALLTARSLQRRLIEQELRTETAEVIAEQRVIMSGICTEL
GARCIYSTPAPPPSSVIMTDKKVEAAAALALQSAVAARLTSAREYLREAIKYDESNECAQ
LESAQLCYRTGDMDGCERHCTTVLRMADGSSSNADAVILLANLYTQQGRAEDARDMFEDL
LRKAPQNYEALVYYLILLYHAGQLTEAKDALGRAAAAVPAGQRADPGLSYARGLYEHFCN
NNAEALRHFNLARLPTDNAWCTRALVRMIRIYLVPTTQDLWVRGANPAAAGAPLSEQQHQ
KSAPPSKGPSAAAATGGTELHDNIRYAEQLLLLLPVHSEERRILQAYCTMATRRQEELGT
ALHLFLECIVAAETGGVSGAATVEKKGRSGADKDASKAGKTPRRVGDSDSDDDDEDLQLL
ASMHEAAAELAQRSSGSNTATLAFALQCKVVHPEAFLGLAISLFVSGQETAARNVLARLL
ESKKVMTKMPVTKPADKSKGDAAERPTPIVISPPIAILTCSEDDTVERAMLLQAYMDTQE
GQLENARFVLQQVLAANQGCGSAWNALGMIYERNQKHKDASRCYQKAWELVQESDPAVGY
KLGFNYLRGGEPVKAIDVCKRVLAHHATYPRIEADVMDVAYSMLRP
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacgatccttcgcacgaactacgccctcctcctcttctatgtgcgagagaag
tactggcaccatgcggaggaggtgtgcctgtccgtcatccagtccacggatgatcacatg
ttccgtgtgtggcgggcgctgacgctggatcgtcaaggcatggcgaacgatgccattcgc
gagtacaagactgtcgagtcgcgccgcgccaccgccgtgccggcgctcatgggcatgcag
ctcatctacaagcataaccgcgaccaggagggcgtggcgcagacggaggcgaagctcgac
gccttcgaagtggctgacaacatgggtgcctgggtgcaggcggcggcgttgtgctgggca
gcgggggacatcaacgcggctagagacatcctgctcaagttcgcggacaacgaggcggcg
atggcataccgggacgagtacacgaactacggcaccatccgtgggtgggtcgatctgctg
tcaggtcgcggtgcgctgctggagaaggccggtgcgctgttctccagcatgctggagatg
gaggcgtcgcagtactcgttctttcaggcgggcaacgaggccggcggcggcggcggcggc
ggcgccaacaagtggaccgacatgaacgccgcgcttggctacgtggccttcctcgagcac
aagacacagttgacgaaggcgcagagtctgctggatcgccttgtcgtcctctatccaaac
tgcagcatcccgccactggtgggcaaggcacgcctgctcatgcaggccgaggactgggag
caggcgatagaagtgatccaccgcatcctcgcccacgacaagggcaatgtcgaggccctc
gcactcgaggcactctacgcgattgggaaggacacccgtcaagacgccgcaccggtgcgg
gtacgtcgcctgctcgacgccgtgcgggccaaggagccgcgcaacgtgacgctgctgcac
caattcgcgcttgtcttctctcgcctagcgggtgatcggctggatctgttaaacatcacc
acgcagttttcggagatggcgtgtgcgctggatagccgcaacggtgatgtgctctgcggg
ttggggtaccagcagctgtaccgacgtgactacaaaaccgccacggcgacgttccgcaag
gccgcaacgctgacggacagcctggatccgctcctagggactgtgacgtgcctcttgcac
cagggcgacttggaggaggcggcgacgcagctaaaattttgtaacgagctgcagccggct
tcgcagcgcaatgcggagctcagcttgctgaacgcacagctgcggtggcgccggcgcggg
ctggaggaggaaacggcggtgttacggtatctggatcaggcagccgaggcgatccggcag
gacgtcaaggagcacgcggggtctgggatggaaatgtacgtgcacctcaacgcccccgtt
gcgctcgccatcgcccatgcctacctcatgcactgccccaacgagccaccggacccgatg
ttcaagcacacggacgtggtcggcgagaagtgcgggcgccatctggcgttcatcgtgcag
cacctgccggcctgcatggaggcgcagctgatgctggccaaggtatggttcatcacaggt
gacgtacgcaaggcgcagaacctgctcaagaactcgcttctcatgcaggagcagccgcta
ccggacgccttcctgctgtcgagccacatatgccagtacatgggggatgtcaagctcgcc
agccaggccctggagcaggcgctaactctcgacttctccctacaggagcagcccctttat
aacctgctactcggcacagtgcaaggcaccacgggcaagtacgcggaggctctcgcgtcg
ttgcagcgcgcctacggtatcgtgaagagcgcggctgccgcgacctccgcgggcaagcca
acggacccgctcagcgtgccggagacggtgactctgtacctgcagctggcgcaggcgcag
ctgcgcgtgcgcgacgtggatgcggcgcgggcgacactggcggaggcagctctcaagttc
cgagactcggcgcagatggggcgcgtcatcattgcgcaggcgatgctggccgcgcgcaca
gatgtcgataaaagcatcgagctgctgcggcaggtgccgagcaagagcgagttctacatt
gccgcccactcgcagcttggcaagctcttcctcacgcagaagcacaacttgggcatgtac
atccagtgcttccaggagatggccgaggcggttccgtcggcacagagctacgtggcgctt
ggcgaagcctacacagtgattcaggagccggagcaggcgatcgcggcgtacgagaaggcc
agggcgctctcgccatccagcagcgaactgtctgtgcgcgtcggccgcgctctcgtcgcg
gcgcacgactacgccaaggcaatccggtactaccaggacgcgctcatatccgacccgcac
ctctccatcgtgcgggccgacctcgccacgctccagtggcggctaggccgcatagatgcg
gcgcgcgagacgatcatgatgtcccccgtgtacgagcttccctccccaaacggcgccggt
gcaggggcggcatccgcggcagcggcggggtctgcggaaacggtggggacggggattgag
cgggtcaacctttacctcctcctgtacaaggtgctgcgcgaccagccgtggacagttccg
ttgagcgcgcaaggcaccgccgacactggcagcgacggcgatcatggcgatacggccctg
gcggcccttctcacagcccgatcgctgcaacgccgcctcatcgagcaggagctgcgtacc
gaaacggccgaagtcatcgccgagcagcgcgtcatcatgtcggggatttgtactgagcta
ggcgcgcggtgtatctacagcacccctgcgccgccgccctcctcggtcatcatgacggac
aagaaggtagaggctgccgcggcgctggcgctccagtccgctgttgcggcccgactgacg
agcgcgcgggagtacctgcgcgaggccatcaagtacgacgagtcgaacgagtgcgcccag
ctcgagtcggcgcagctctgctaccgcaccggcgacatggacgggtgcgagcgacactgc
acgacagtgctgcgcatggcagacggcagttcgagcaatgcggatgcagtgatactgctg
gcgaacctgtacacgcagcagggtcgcgccgaggacgctcgggacatgttcgaggacctg
ctgaggaaggccccccagaattacgaagctttggtctactacctcatcctgctctaccac
gctggacagctgacggaggccaaggacgcgctgggtagggcagcggcagccgtaccggcg
ggccagcgcgccgacccgggcctgagctacgcgcgcggcctctacgaacacttttgcaac
aacaacgccgaggctctgcgacacttcaacttggcgcgtctgccaaccgacaacgcgtgg
tgcacgcgggcgttggtgcgcatgatccgaatttacctcgtgccgaccacgcaagatctc
tgggtgcgaggcgcaaacccggcagcggcaggtgcaccgctctcggagcagcagcaccag
aagtcagcgcccccgagcaaaggcccctcagcggcggccgcgaccggtggcacggagctg
cacgacaatatacgctacgcagagcagctgctgttactgctgccggtgcacagcgaggaa
agacgcattcttcaggcatactgcacgatggcgacgcggcgccaggaggagctcgggacg
gcgctgcatctattcctggagtgcatcgtggcggccgaaaccggcggcgtgtccggcgcg
gcgacggtcgagaagaaagggagaagtggggccgataaagacgcctccaaagccgggaag
acgccgcggcgtgtcggtgacagcgactcggacgacgacgacgaggacctccagctcctt
gcgagcatgcacgaggccgccgcggagctggcgcagcgcagcagcggcagcaacacagcc
acactcgccttcgcgctgcagtgcaaggtggtgcacccggaggcgtttctcgggctggcc
atcagcctctttgtttctgggcaggagacggccgcgcgcaacgtgctggcgaggttgctg
gagagcaagaaggtcatgacgaagatgccggtgacgaagccggcggacaagagcaagggc
gacgccgcggagcggccaaccccgatcgttatctctcccccgatagcaatcctcacctgc
tccgaggacgacacagtcgagcgtgcgatgctcttgcaggcgtacatggacacgcaggag
ggccagctcgagaatgctcggttcgtgctgcagcaggtgctggcggccaatcagggctgc
ggttccgcctggaacgcgctcggcatgatctacgagcggaaccagaaacataaggacgcc
tcgcggtgctatcagaaagcctgggagctggtgcaggagtccgacccggctgtcggttac
aagctggggttcaactacctacgtggcggcgagccggtgaaggcgattgacgtgtgcaag
cgcgtgctcgcccaccatgccacgtacccgcgcatcgaggcagatgtcatggacgttgcc
tattcaatgctacggccgtaa
DBGET
integrated database retrieval system
