Leishmania mexicana: LMXM_07_0340
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Entry
LMXM_07_0340 CDS
T02288
Name
(RefSeq) putative ATP-dependent DEAD/H RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_07_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmi03041
]
LMXM_07_0340
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_07_0340
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_07_0340
Spliceosome [BR:
lmi03041
]
Complex A
U1 snRNP components
U1 related factors
LMXM_07_0340
Complex B
LMXM_07_0340
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_07_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
CMS1
GOLGA2L5
Motif
Other DBs
NCBI-GeneID:
13446981
NCBI-ProteinID:
XP_003872179
UniProt:
E9AL45
LinkDB
All DBs
Position
7:complement(152493..153740)
Genome browser
AA seq
415 aa
AA seq
DB search
MLEFSDLVAPDAIHQGFMDAGFQKPTPIQSVSWPVLLNSRDIVGVAKTGSGKTMAFMIPA
ALHIMAQPPLQPGDGPIALVLAPTRELAVQIETETRKALTRVPSIMTTCVYGGTPKGPQQ
RALRAGVHVCIATPGRLIDLLETNCTNLLRVTYLTLDEADRMLDMGFEDQIRKICSQIRT
DRQTLMFSATWPREIRNLAASFQKDFVRVHIGSEELVANADVHQHVFVVEGYHKEEKMEE
ILRQVGPQRVLVFVKTKKSCDILQDRLGRALRQTVLAIHGDKLQSSRDYVLDRFRKDERA
ILVATDVAARGLDIKDLDVVVNYDMPLNIEDYVHRIGMLTDFRLLTVSLAPIPSVYLSLC
AYVCVCVCVCRFFFCCVSPCCPCCPTTTATASATDIVAVFPSTSLASSACPDQLM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagttttccgacctggttgccccggacgccattcaccagggtttcatggacgcc
gggttccaaaagccgaccccgattcagtccgtctcctggccggtcctgctgaactcgcgt
gacatcgtcggcgtggccaagacgggctctggcaagacgatggccttcatgatccccgcg
gccctgcacattatggcgcagcctccgctgcagcctggcgacggccccatcgccctcgtc
ctcgccccgacccgcgagctggcggtgcagattgagacggagacacgcaaggctttgacg
cgcgtgccgagcatcatgacgacgtgcgtgtatggtggcaccccgaaggggccgcagcag
cgtgccctgcgtgccggtgtgcacgtctgcattgccacgccgggtcggctgattgacctg
ctggagacgaactgcacgaatcttctgcgcgtcacctacctcaccctcgacgaggcggat
cgcatgctggatatgggctttgaagaccaaatccgcaagatctgctctcagatccgcaca
gaccgccagacgctcatgttctcggcgacctggccgcgcgagatccgaaacctcgccgcc
agcttccagaaagactttgtgcgtgtccacatcggctccgaggagcttgtggccaacgct
gatgtgcaccagcacgtcttcgtcgttgagggatatcacaaggaggagaagatggaggag
attcttcgccaggtcggaccgcagcgcgtacttgtctttgtgaagacaaagaagtcgtgc
gacattctgcaggaccgccttggccgcgcgctgcggcagacggtgctcgccattcacggt
gacaagctgcagtccagccgtgactacgtgctggaccgcttccgcaaagatgagcgtgcg
atcctcgtcgccaccgacgtggcggcgcgcggtctggatatcaaggacttggacgtggtg
gtgaactacgatatgccactgaacatcgaagattatgtgcatcgtattggtatgttgacg
gacttccgccttctcacggtatcgctagccccgatcccctctgtgtatctatctctgtgt
gcgtatgtgtgtgtgtgtgtgtgtgtgtgccgctttttcttctgttgtgtctcaccgtgt
tgcccgtgctgtcccaccacgactgccactgcctccgccacggacatcgtcgccgtcttt
ccctccacctcactcgcgtcttcagcttgcccagaccagcttatgtaa
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