KEGG   Leishmania mexicana: LMXM_08_29_0640
Entry
LMXM_08_29_0640   CDS       T02288                                 
Name
(RefSeq) hypothetical protein
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
lmi  Leishmania mexicana
Pathway
lmi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LMXM_08_29_0640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lmi03400]
    LMXM_08_29_0640
Enzymes [BR:lmi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     LMXM_08_29_0640
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     LMXM_08_29_0640
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     LMXM_08_29_0640
DNA repair and recombination proteins [BR:lmi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     LMXM_08_29_0640
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     LMXM_08_29_0640
SSDB
Motif
Pfam: DcpS_C zf-C2HE HIT ATR1_N zf-C2H2_2
Other DBs
NCBI-GeneID: 13447086
NCBI-ProteinID: XP_003872498
UniProt: E9AM14
LinkDB
Position
8:912956..913750
AA seq 264 aa
MQASPVLAGAVVRRTAAASVGSEPRTKLPFLINVVKRARKSANTVGASTPALPSTLSTTE
PPIQATAFKPYPLLSPGETKQAAGSSLLYKDDVCALVNDAFPKSMVHCLVMPLDLRLESL
NALTKKDVPLLRHMMHVGDEYVHYLKKAVPHAYKARRFIAGFHALPSLPMLHLHVLSTDL
DSPCLKSKKHYNSFATFFFLTSDRVLEDLERHGRVTLNQDVARLRQMEEQDMKCLWCGTA
LPNVPAMKSHIQSCPQNKAVEKSS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcaagcctcaccggtgctggccggcgcggtggtgcgccgaacggcggcggcctccgta
ggcagcgaacctcgcaccaagttaccctttcttatcaatgttgtcaagagggcgcggaag
tctgccaacacagtgggtgcgtcgacgccggcactcccctcgacgttgtcgacgacggag
ccgcctatccaagccaccgccttcaagccatacccgcttctgagccccggcgagaccaag
caggccgccggcagctccctcctctacaaggacgacgtttgcgcgcttgtgaacgatgca
ttccccaaatcgatggttcactgcctggtcatgccactggacctccgcctagagtccctc
aacgccctcaccaagaaggacgtcccactgctgcgccacatgatgcacgtgggggatgag
tacgttcactatttgaagaaggcggttccccacgcctacaaggcgcgccggttcattgcg
ggattccacgcccttccctcgctgcccatgctgcatctgcacgtgctgtctacggatctg
gacagcccgtgcctcaagagcaagaagcactacaacagcttcgccactttcttcttcctc
acaagcgaccgcgtcttggaggacctggagcggcacggccgcgtgacgctgaaccaggac
gtcgcgcgccttcgacagatggaagagcaggacatgaagtgcttgtggtgcggcaccgcg
ctgccgaacgtgcccgctatgaagtctcacatccagagctgcccgcagaacaaagccgtg
gagaaatcgtcgtag

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