Leishmania mexicana: LMXM_08_29_0640
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Entry
LMXM_08_29_0640 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMXM_08_29_0640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_08_29_0640
Enzymes [BR:
lmi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
LMXM_08_29_0640
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
LMXM_08_29_0640
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
LMXM_08_29_0640
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
LMXM_08_29_0640
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
LMXM_08_29_0640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
ATR1_N
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
13447086
NCBI-ProteinID:
XP_003872498
UniProt:
E9AM14
LinkDB
All DBs
Position
8:912956..913750
Genome browser
AA seq
264 aa
AA seq
DB search
MQASPVLAGAVVRRTAAASVGSEPRTKLPFLINVVKRARKSANTVGASTPALPSTLSTTE
PPIQATAFKPYPLLSPGETKQAAGSSLLYKDDVCALVNDAFPKSMVHCLVMPLDLRLESL
NALTKKDVPLLRHMMHVGDEYVHYLKKAVPHAYKARRFIAGFHALPSLPMLHLHVLSTDL
DSPCLKSKKHYNSFATFFFLTSDRVLEDLERHGRVTLNQDVARLRQMEEQDMKCLWCGTA
LPNVPAMKSHIQSCPQNKAVEKSS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctcaccggtgctggccggcgcggtggtgcgccgaacggcggcggcctccgta
ggcagcgaacctcgcaccaagttaccctttcttatcaatgttgtcaagagggcgcggaag
tctgccaacacagtgggtgcgtcgacgccggcactcccctcgacgttgtcgacgacggag
ccgcctatccaagccaccgccttcaagccatacccgcttctgagccccggcgagaccaag
caggccgccggcagctccctcctctacaaggacgacgtttgcgcgcttgtgaacgatgca
ttccccaaatcgatggttcactgcctggtcatgccactggacctccgcctagagtccctc
aacgccctcaccaagaaggacgtcccactgctgcgccacatgatgcacgtgggggatgag
tacgttcactatttgaagaaggcggttccccacgcctacaaggcgcgccggttcattgcg
ggattccacgcccttccctcgctgcccatgctgcatctgcacgtgctgtctacggatctg
gacagcccgtgcctcaagagcaagaagcactacaacagcttcgccactttcttcttcctc
acaagcgaccgcgtcttggaggacctggagcggcacggccgcgtgacgctgaaccaggac
gtcgcgcgccttcgacagatggaagagcaggacatgaagtgcttgtggtgcggcaccgcg
ctgccgaacgtgcccgctatgaagtctcacatccagagctgcccgcagaacaaagccgtg
gagaaatcgtcgtag
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