KEGG   Leishmania mexicana: LMXM_08_29_2500
Entry
LMXM_08_29_2500   CDS       T02288                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
lmi  Leishmania mexicana
Pathway
lmi03250  Viral life cycle - HIV-1
lmi03272  Virion - Hepatitis viruses
lmi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    LMXM_08_29_2500
   03272 Virion - Hepatitis viruses
    LMXM_08_29_2500
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    LMXM_08_29_2500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lmi04131]
    LMXM_08_29_2500
   03400 DNA repair and recombination proteins [BR:lmi03400]
    LMXM_08_29_2500
Membrane trafficking [BR:lmi04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    LMXM_08_29_2500
DNA repair and recombination proteins [BR:lmi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    LMXM_08_29_2500
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 AAA_5 AAA_22 AAA_14 USP8_dimer DUF815 RuvB_N TIP49 AAA_17 AAA_24 AAA_2 AAA_33 AAA_25 RNA_helicase NPHP3_N nSTAND_NTPase5 Viral_helicase1 Parvo_NS1 AAA_28 AAA_18 IstB_IS21 PPV_E1_C Mg_chelatase nSTAND3 ResIII NACHT AAA_7 PhoH bpMoxR AFG1_ATPase
Other DBs
NCBI-GeneID: 13447216
NCBI-ProteinID: XP_003872308
UniProt: E9ALH4
LinkDB
Position
8:complement(<118579..>119916)
AA seq 445 aa
MSVDFTAKAVELFKKAATLDENKEYEQAYRWYMETIDVFLTAIKYENKNPTKREYMRSKV
SDIIARAEKIKEFLDRSKDGDGAAQGGSGATAQKTASASKKAKEDDEDKQRMRSSLGSAI
VKVKPNVRWDQIAGLEAAKQALKESVILPTKFPQLFTGKRKPWRGILLYGPPGTGKSYLA
KAVATEADGTFLSVSSSDLLSRWLGDSEKLVRSLFEMAREAYKTDGKPSIIFVDEIDSLV
SARSDSENDASRRVKTEFLVQMQGVGYDDEGVLVLAATNIPWSLDSAIRRRFERRIYIPL
PEFPARVQMFKIHLGDTPNTLVDEDWLELGRRTEMYSGSDIENVVRNALMECIRTLQVAT
HFKRVVGPDPHDPTRMVNNRLVPCSPGDPDAFPMSAVEITEPELLMPMPVTKEDFIKALR
TSKPSVNDEDIERHIKFTADFGQEG
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgtccgtcgacttcacggccaaggccgtcgagctcttcaagaaggccgcaacgctggat
gagaacaaggaatacgagcaggcgtaccggtggtacatggagacgatcgacgtgttcctg
acggccatcaagtacgagaacaagaaccccacaaagcgggagtacatgcgaagcaaggtg
tctgacatcattgcccgcgccgagaagatcaaggagttcctcgaccgttccaaggacgga
gacggcgccgcccagggcggctccggagccacagcgcaaaagaccgcgtctgccagcaag
aaagccaaggaggatgacgaggacaagcagcgcatgcggagcagcctcggtagcgccatc
gtcaaggtgaagcccaacgtgcgctgggaccagatagcgggcctcgaggcggcgaagcag
gccctgaaggagtccgtcatcttgccaacgaagttcccgcagctcttcactggcaagcgc
aagccgtggcgcggcatcctgctctacggcccccctggcacgggtaagtcctaccttgcc
aaggcggtggccaccgaggcggacggcacctttcttagcgtcagtagctccgatctgctc
tcccgctggctcggtgactcggagaagctcgtgcgcagtctcttcgagatggcccgcgag
gcgtacaagacagacgggaagccgtccatcatctttgtggatgagatcgactctctcgtc
tccgcgcgctccgacagcgagaacgacgcttcgcggcgtgtcaagacagagtttcttgtg
cagatgcagggtgtgggttacgacgacgaaggtgtgctcgtactagctgccaccaacatc
ccatggtcgcttgatagcgccatccggcgtcggtttgagcgccgtatttacataccgctt
ccggagttcccggcacgcgtgcagatgttcaagatccacttgggcgacacccccaacacg
ctcgtcgacgaggactggctggagctagggaggcgaacagagatgtactcgggtagcgat
atcgagaacgttgtgcgcaatgctctgatggagtgcatccgcacgctgcaggtggcgaca
cacttcaagcgcgttgtcggccctgacccgcacgaccccacacgcatggtgaacaaccgc
ttggtgccgtgctcgcctggtgacccggacgcgttcccgatgtcggctgtggagatcacg
gagccggagctgctcatgccgatgccagtgaccaaggaggacttcatcaaggcactgcgc
accagcaaaccttccgtgaatgacgaggatattgagcggcacatcaagttcaccgcggac
tttggccaggagggttaa

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