KEGG   Leishmania mexicana: LMXM_18_0780
Entry
LMXM_18_0780      CDS       T02288                                 
Name
(RefSeq) putative DNA-directed RNA polymerases II
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lmi  Leishmania mexicana
Pathway
lmi03020  RNA polymerase
lmi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LMXM_18_0780
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMXM_18_0780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lmi03021]
    LMXM_18_0780
   03400 DNA repair and recombination proteins [BR:lmi03400]
    LMXM_18_0780
Transcription machinery [BR:lmi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     LMXM_18_0780
  RNA polymerase III system
   RNA polymerase III
     LMXM_18_0780
  RNA polymerase I system
   RNA polymerase I
     LMXM_18_0780
DNA repair and recombination proteins [BR:lmi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LMXM_18_0780
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF4892
Other DBs
NCBI-GeneID: 13447653
NCBI-ProteinID: XP_003874092
UniProt: E9ARL5
LinkDB
Position
18:315152..315871
AA seq 239 aa
MPAIGQEKLELHKCFRILQTSAEMMSDRKYKVAQHVVPGSLGEFIERYVEEVEVTEDGGA
AVGGGPTDAPPRRKQVIRRDKMTLACEREVGEGNTLKAVVYFCPPNHLSSEVVKKIAEDA
LNEGYQRVVFVTPSKPNPIVRKTMDTYNRSEQDLRFELFEEDELSVNITHHELVPKHTPL
SEEELKDVLHAHALELHQLPRILSTDPVARYYGLKRGQVVRIERKSMSAGLYVTYRQVV
NT seq 720 nt   +upstreamnt  +downstreamnt
atgccagccatcggacaagagaagctagagctccacaagtgcttccgcattctgcagacg
tcagcggagatgatgtcggaccgaaagtacaaggtggcgcagcatgtggttcctggctcc
ctcggcgagttcatcgaacgttacgtcgaggaggtggaggtgacggaggacggcggcgcg
gcggtcggcggtggccctaccgatgccccgccccgtcgcaagcaggtgattcggcgggat
aagatgaccctggcatgtgagcgtgaggtgggcgagggtaacacgctcaaggcggtcgta
tacttctgcccaccaaaccacctctcgtcggaggtggtgaagaagatcgccgaggatgcg
cttaatgaaggctatcagcgggtggtgttcgtgaccccatcgaagccgaacccaatcgtg
cgcaaaacgatggacacgtacaaccgtagtgagcaggatctgcgcttcgagctgttcgag
gaggatgagctctctgtgaacatcacccatcacgagctagtaccgaagcacacgccgctg
tcggaggaggagcttaaggacgtgctgcacgctcatgcgctggagctgcatcagctgccc
cgcatcctgtccaccgaccctgtagctcgctactacggactgaagcgtggccaggtagtc
cgcattgagcgtaagagcatgtcagcgggcctctacgtaacctaccggcaagtcgtgtga

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