Leishmania mexicana: LMXM_20_0010
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Entry
LMXM_20_0010 CDS
T02288
Name
(RefSeq) DNA-directed RNA polymerase polypeptide,putative
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMXM_20_0010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_20_0010
Enzymes [BR:
lmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMXM_20_0010
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LMXM_20_0010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
13447926
NCBI-ProteinID:
XP_003875064
UniProt:
E9AUE0
LinkDB
All DBs
Position
20:complement(<2637516..>2640914)
Genome browser
AA seq
1132 aa
AA seq
DB search
MFTGAHAMSDFGEEYQRKKLEMLPALMGMRGILNHHIASFDHLIEVELQRILLNESNVEI
KSTVDPDFVIRYQNIRICRPQEIVGKGHIPKLVTPQECRIRDMTYRGDMIVDVQYTSRDR
SRAMLVEKDVKIGTIPIMLKSKCCNLYRKTREELVNMRECPLDPGGYFIIKGVEKVCLVQ
EQQSKNRVIIEADEHGSISAHVQSKTHYSISKCAVTFKKGSIVLTHRSFTEDIPIIVVLK
ALGLENDQHITQCIGTSPEFQAILFPCFEEARLLNVVTQNDALQYIGEKRKETVWEAEET
QQRQVNRSKADKAAEFLANVLLCHIREAQVQKDWNFRHKAFYVCFMVRGMIEASFDASLL
DERDFYGNKRFETTGTLMALLFEDLLKQFNRVVKTAMDQQLSKKDSTRPFNVKQLMESKM
EVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVSGP
RSLQPSQWGMVCPCDTPEGESCGLVKNFATLSQVTLDLNDNYVRAAAHSLGVEEIDTVTP
TDFLHYYTVFLNGTLIGIHRYPNRLCAGIRALRRSGRLHPHVSISTQPRQRTVQIGSDGG
RIVRLLIIVRDGKPAVTSAHLDRLRDRLCTHNDFLAEGLIEYVDVNESNDCLIAVYPADI
RPYTTHLEVEPLSLLGVVAGIIPYPHHNQSARNTFQSAMGKQALGTVALNQYIRADTVLL
LGAYPQRPLCRTKAMSLTHYERLGAGINAMVCVMSYSGYDIEDAQVYNKSSLDRGYGRCV
VLRKHEVDLEKYAGGEFDVILPPEKNSGTGKFKALNPDGVASKGVLVQQYDVLVNKFTPV
AGGDPRPAPLVYKYPQPAVVDHVIISPPGDYDRSLDVDQKVKVVTREVRPPEPGDKFSSR
HGQKGVVGLIVNGVDMPFNERGMCPDMIMNPHGFPSRMTVGKLLELVCSKAAALRGSMGD
GTAFGGDSADSISQQLLSFGYNYHGKDVFYSGITGELMQGYVFFGPIYYQRLKHMVTDKM
HARSTGPRSMLTRQPTEGRSRSGGLRVGEMERDCMVGYGASNLLNERLLISSDMFTADIC
HVCGNLGYNNRCTYCKTKGTTSKVNMPYAFKLLIQELQGMGVSLRLTMDSPT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgttcacaggggcgcacgccatgtcagacttcggggaggagtaccagcggaagaagctg
gagatgcttcccgcactcatgggtatgcggggcattctcaaccaccacatcgcctcattc
gaccacttgatcgaggttgagcttcagcgaatcctgctgaacgagtccaacgtcgaaatc
aagagcaccgtcgacccggactttgtgattcgttaccagaacattcgcatctgccggcca
caggagattgttggcaaaggtcacataccaaagcttgtgacgccgcaggagtgccgtatt
cgggacatgacgtaccgaggcgacatgatcgtagatgtccagtacaccagccgcgaccgc
tcgcgagcgatgctggtcgagaaagacgtaaagatcgggactataccgattatgcttaag
tccaagtgctgcaacctgtaccgcaaaacacgcgaagagctggtgaacatgcgcgagtgc
ccactcgaccctggtggctacttcattatcaaaggcgttgaaaaggtgtgcctggttcag
gagcagcagagcaagaaccgtgtcatcattgaggctgacgaacacggcagcatctcggcc
cacgtgcagagcaagacgcactactccatctccaagtgcgccgttaccttcaagaagggc
agcatcgtgctcacgcatcgctccttcacagaggacatcccgatcattgtcgtgctcaag
gcactcggcttggagaatgatcagcacatcacccagtgcatcggcacttcgccagagttt
caggcgatcctttttccgtgcttcgaggaggcgcgtctgttgaacgtggtcacgcaaaac
gacgccctgcagtacatcggcgagaagcggaaggagacggtgtgggaggcggaggagacg
cagcagcgccaagtgaacaggtcgaaggccgacaaggcggccgagtttctcgccaacgtg
ctgctctgccacattcgggaggcgcaggtgcagaaggactggaactttcgccacaaggcg
ttctacgtctgtttcatggtacgtggcatgatcgaggccagcttcgacgcatcgctgctt
gacgagcgcgacttctacggcaacaagcggttcgagacgaccggcacgctgatggcgctc
ttgtttgaggacttgctgaagcaatttaaccgcgttgtgaagacggcgatggatcagcag
ctgtcgaaaaaggactccacgcgccccttcaacgtgaagcagctgatggaaagcaagatg
gaggtgatccagaacggcatgcgcatggcgatcagcagtgggcgatgggacttgaagcgc
ttcaacatgaaccggcagggcatcacacaggtgctctcgagactctcgtacattgccagc
ctcggcatgatgacaaggctggcgtcctcgttcgagaagacgcgcaaggtaagtggccca
cgctcgttgcagccgagtcagtgggggatggtgtgcccctgcgatacgccagaaggtgag
agttgcggtctggtgaaaaactttgcgacgcttagtcaggtcaccttggacctgaacgac
aactacgtccgtgccgccgcgcactcacttggcgtggaggagatcgacacggttacgccg
acggactttctgcactactacaccgtgttcctcaacggtaccctcattggcattcaccgc
taccccaaccgactctgcgccggcatccgcgctctccggcgctccggccgtcttcacccg
cacgtgtccatctcaacgcagccacggcagcgcaccgtccagatcggcagtgatggcggt
cgcatcgttcgcctgctcatcatcgtgcgggacggaaagccggccgtcacctccgcccac
ctcgaccgcctgcgcgaccgcttgtgcacccacaacgattttctggcggaggggctgatc
gagtacgtggacgtgaatgaatcgaatgactgcctcatcgccgtctaccctgccgacatc
aggccctacaccacccacctcgaagtggagccgctgtcgctattgggcgtcgtggccggc
attatcccttacccgcaccacaaccagtccgcccgaaacaccttccagtccgccatgggc
aagcaggccctcggcaccgtggcgctcaaccaatacatacgcgccgacacggtgctcctc
ctcggtgcctacccacagcggcctctgtgccgcacaaaggccatgtcgctgacacactac
gaaaggctcggcgccggcatcaacgccatggtgtgcgtcatgagctacagcggttacgat
attgaggatgcgcaggtgtacaacaagtcctccctggaccgcgggtacggccgctgcgtg
gtgctgcgcaagcacgaagtggacttggaaaagtacgcgggcggcgagttcgatgtcatc
ttgccgccggagaagaatagcggcaccgggaagttcaaggcactcaacccagacggcgtt
gccagcaaaggtgtccttgtgcagcagtacgacgtcctcgtgaacaagttcaccccggtc
gctggcggtgacccgcggccggcgccgctagtgtacaagtatccgcagcctgcggtcgtt
gaccatgtcatcatctcgccccccggcgactacgacaggtcgctcgacgtcgatcagaaa
gttaaggtggtcacgcgggaggtgcgaccaccagagcccggtgacaagttctcatcacgt
cacggccagaagggcgtcgtcggcctgattgtgaacggagttgacatgcctttcaacgag
cgcggcatgtgccccgatatgatcatgaacccgcacggcttccccagccgcatgacggtc
ggcaagctgctcgagctcgtttgctctaaggcggcagcgcttcgagggtcgatgggcgac
ggcaccgccttcggcggcgactcggccgacagcatcagccagcagctcctctcctttggc
tacaactaccacggcaaggatgtcttttattcgggaatcacgggcgagttaatgcagggc
tacgttttcttcggccccatctactaccagcgcctcaagcacatggtcacagacaagatg
cacgcccgctcgaccgggccacggtcgatgctgactcgccagccaaccgagggccggtct
cgcagtggaggactccgcgttggtgagatggagcgcgactgcatggtgggctacggcgcg
tccaacctcctcaacgagcgactgcttatcagctccgacatgttcacggcggacatttgc
cacgtgtgcggtaacctcggctacaacaatcggtgcacgtactgcaaaaccaaggggact
acctccaaggtgaacatgccctacgccttcaagctactgatccaagaactacagggcatg
ggtgtcagtcttcgcctcacaatggactccccgacatag
DBGET
integrated database retrieval system
