Leishmania mexicana: LMXM_21_1552
Help
Entry
LMXM_21_1552 CDS
T02288
Name
(RefSeq) putative RNA helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03013
Nucleocytoplasmic transport
lmi03015
mRNA surveillance pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_21_1552
09122 Translation
03013 Nucleocytoplasmic transport
LMXM_21_1552
03015 mRNA surveillance pathway
LMXM_21_1552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_21_1552
03041 Spliceosome [BR:
lmi03041
]
LMXM_21_1552
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_21_1552
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
LMXM_21_1552
Spliceosome [BR:
lmi03041
]
Complex C
Other components
EJC/TREX
LMXM_21_1552
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
LMXM_21_1552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
EH_Signature
Motif
Other DBs
NCBI-GeneID:
13454048
NCBI-ProteinID:
XP_003875413
UniProt:
E9AVE1
LinkDB
All DBs
Position
21:complement(614451..615758)
Genome browser
AA seq
435 aa
AA seq
DB search
MSSDLADFDGDDVRTTVVAAQPMGVGMGTHSAVALGGFQDFCLKSELANAIRENGFEHPS
EVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQVEKVPQGQKPYCQAVVLVHAREL
AYQIEQEFKRFSKYLPYATTGVFFGGIPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAF
DTTRVKWFVVDEFDRCLEDVKMRRDVQEIFMKLPKEKQVMMFSATMTDELRDVAKKFMKD
ATEIYVDQRAKLTLHGLAQFYMSVTESEKTRRLAEILDVVEFNQAIIFTSSVERCEALNR
QLQQMKFPSQAVHSRMSQEERLRVYESCKANNTRIMVATDLFGRGVDFDRINLVVQYDMA
SEADSYLHRVGRAGRFGTKGLTIAFITTDEKEIKRENRTYTDGGIMKEVQERFEMKVEEL
TDINTQLNENQYMNK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgatcttgcggacttcgatggcgatgatgtcaggaccaccgtcgtggcggcg
cagccgatgggcgtcggtatgggcacccacagcgccgtcgccctcggtggcttccaggac
ttctgcctgaagagcgagctcgcgaatgccatccgcgagaacggctttgagcacccgtcg
gaggtgcagcaccaggcgctgcctaaggcgatgcttggcgccgatattcttgcccaggcc
aagtcaggtatgggtaagacggctgtcttcgtcttcgcgctgctggagcaggtggagaag
gtaccgcagggacagaagccgtactgccaggctgtcgtgctggtgcacgcccgcgagctg
gcctaccagatcgagcaggagttcaagcgcttcagcaagtaccttccatacgccaccacc
ggcgtcttcttcggcggcatcccggaggacgagaacgtgaagcagctgaagaaggaggtg
ccagcgatcatcgtcggcacgccgggccgcatgaaggcgctcatccagaacaaggccttt
gacacgacgcgcgtgaagtggtttgtggtcgacgagttcgaccgctgcctggaggacgtg
aaaatgcgccgtgacgtgcaggaaatcttcatgaagctgcccaaggagaagcaggtgatg
atgttctcggccacgatgacggatgagctgcgcgatgtggcaaagaagttcatgaaggac
gcgacggagatttacgtggatcagcgggcaaagctaaccctgcacggcctggcgcagttc
tacatgagcgtcacggagtcggagaagacgcgccggctggcggagatcctcgacgttgtg
gagttcaaccaggcgatcatcttcacatcctcggtcgagcgctgcgaggcgctgaaccgc
cagctacagcagatgaagttcccgtcgcaggccgtgcactcccgcatgagccaggaggag
cgcctgcgcgtgtacgagagctgcaaggcgaacaacacccgcatcatggtcgctaccgac
ctcttcggccgcggcgtcgactttgaccgcatcaacctcgttgtgcagtacgacatggcc
tccgaggccgacagctaccttcaccgagtcggccgcgccggccgcttcgggacgaaggga
ctgacaattgccttcatcacgacagacgagaaggagatcaagcgcgagaaccgcacctac
acggatggcggcatcatgaaggaggtgcaggagcgcttcgagatgaaggtcgaggagctg
acggacatcaacacccagctgaacgagaaccagtacatgaacaagtaa
DBGET
integrated database retrieval system
