KEGG   Leishmania mexicana: LMXM_22_1580
Entry
LMXM_22_1580      CDS       T02288                                 
Name
(RefSeq) exosome complex exonuclease RRP45 homolog,putative
  KO
K03678  exosome complex component RRP45
Organism
lmi  Leishmania mexicana
Pathway
lmi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMXM_22_1580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmi03019]
    LMXM_22_1580
Messenger RNA biogenesis [BR:lmi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     LMXM_22_1580
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Pribosyltran_N NAD_binding_5
Other DBs
NCBI-GeneID: 13454229
NCBI-ProteinID: XP_003875612
UniProt: E9AVZ0
LinkDB
Position
22:633861..634952
AA seq 363 aa
MLYRTAVPVPGDALVQRNLEFTRTAWKAGLRPDQREANQLRVVEMDFPLLSRDVVQVKCG
NTVATATVSCDLVEPSPYRPKHGFFEVHARQLLHERDPLDQLKEIKRISMYLTRLLSGSV
LETEGLCVIPGRRVWSIDAEVIIVNNDGNVQDVAQWAVMAALQHVRRPELTIRGEDVVVH
PPHERDPVPLPLHHIPLSFTFAVCANPQEVQLAVRAATLRRAQGSRGGAPSGANADEGDG
EAKDLGWSSDALQVVVDPSLEEAAAAACTVSVAVNGEGYVCSLEKADGCDVSIAYLGQCM
ETATKLTQALLMQMKESMEAHNAKRTEAVRSQFLWAQQRRGIQAIGTPGDEGEHASKKVK
SEE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgctttaccgcacggcagttccagtgccgggtgacgcccttgtgcagcgcaatctggag
ttcacgcgaaccgcgtggaaggcaggcctccgtcccgatcaacgcgaggcgaatcagttg
cgggtggtggagatggacttcccgctgctctcccgtgacgtggtgcaggtgaagtgcggc
aacactgtcgccacagccacggtcagttgcgaccttgtagagccctccccgtaccgtcca
aagcatggcttcttcgaggtgcatgctcgccagctgctgcacgaacgcgaccctctcgac
caattgaaggagattaagcgcattagcatgtacctgacacgactactctccggcagtgtg
ctggagacggaggggctttgcgtcatcccaggccgccgggtgtggagcattgatgcagag
gtgatcattgtgaacaatgatggcaacgtgcaagatgtggcgcagtgggccgtgatggct
gccctgcagcacgtacggcggcccgagctcactattcgtggcgaagacgtggttgtacac
cctccgcatgagcgggacccggtgccgctgccgcttcatcacatccctctctccttcacg
tttgctgtctgcgccaatccgcaggaggtgcagctggcggtgcgcgcggccacgctgcgt
cgtgcacagggatctcgaggcggtgctccctccggggccaacgcggatgagggcgacggt
gaagcgaaagatctcggctggtcgagtgacgcactgcaggtcgtggtggatccgtcttta
gaggaagctgccgcggccgcgtgcacggtgtcggtggccgtgaacggtgagggttacgtg
tgctcgctggagaaagcggatggctgcgatgtgtcaatcgcgtacctgggacaatgcatg
gagactgccacgaagctcacgcaggcgctgctgatgcagatgaaggagtcaatggaggcg
cacaatgcgaagcgcacagaagcggtgcgcagccagtttctctgggcacagcagcgtcgc
ggcatccaggctattgggaccccgggtgacgagggggaacacgcaagcaagaaggtcaag
tccgaggaatga

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