Leishmania mexicana: LMXM_23_1550
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Entry
LMXM_23_1550 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
lmi
Leishmania mexicana
Pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_23_1550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_23_1550
03041 Spliceosome [BR:
lmi03041
]
LMXM_23_1550
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
LMXM_23_1550
Spliceosome [BR:
lmi03041
]
Complex B
Other components
Prp19-related factors
LMXM_23_1550
Complex C
LMXM_23_1550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
Suf
NRDE-2
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
13454291
NCBI-ProteinID:
XP_003875809
UniProt:
E9AWI7
LinkDB
All DBs
Position
23:729768..732152
Genome browser
AA seq
794 aa
AA seq
DB search
MDGDPRVSALQWEVTKEASASPKTWAELARTTAAVAVVDPVERANAVTLVYERALRAFAS
SYKLWTAYISYRQQETSRLCGLNEWFQAVREVYERALAELPKMPMLWVSYMEFVVASEVP
RVTMTRHILARALAALPATQHHHLWKVAKRWCAMPVVPSATVRAVWRLYLSFQRSLHSKR
EYFQVLVQKGDFNGFLHECVHLGLPNKSNKGAVEERDLLLSDMSFWETVQTALQGKGWRF
TGDIGPLRELVALGKRRCASPVELSMAFAVFLYGQGHMREGRQELRQLLDEAPEAQTLIS
LYHLAVEVEDQLVESFAVDPDLRRLDDAAYNGVVQHLFGDGDPLSHLERLAREFPLLLNQ
SQLRNSPHNATLWLKRVELVQEDVYAGRSTFDDLVDLYRQAIQQCTAGMSRVDGAAAQLF
SSCAQALIRGGKLDSAVSVLSEGAWCVPFTSAALNVQLLGLLVEVQLMSAASPLSVRDAL
ADRLTSGARSGASKRSRNGLLQSSAALPHVVHHPHTWIMWCDVCAAYDSANAAAWRRLVE
ALATSPAFSAEAACYVAHKAYVCRQESMAVIMLERAVAATRQQPTAQLFVLEQYLSFLYL
RDGRQVPLHQFREVFSLLQQVTPVAIRTAPSAVIDLHVSCAYMEAAIGLYGTAVRMMQEI
SLVATAALRGRDEHLRILQAILEHSITFTEQRRGYDSVRTYCGVLVQRLQHALLLQRVAL
HWAAIEKRSGNTAQAHLILDACGDSQDPSTEHGEVYWRLWESLCTSVEEFEKVARRRQQA
LIRFSKRENAKGAE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgacccgcgcgtgagcgccctacaatgggaggtgaccaaagaggcctcggcg
tcgcccaagacgtgggcggagctggcccgcaccaccgctgcggtcgccgtggttgatcct
gtggaaagggcgaacgcggtgacgctagtgtacgagcgcgccttgcgagcgtttgcttcc
tcctacaagctgtggacggcctacattagctatcgccagcaggagaccagtaggctgtgt
ggactgaacgagtggttccaagcggtgcgcgaggtgtacgagcgggcgttggcggagctc
ccgaagatgccgatgctgtgggtcagctacatggagtttgtcgttgcctctgaagtgccg
cgtgtgacaatgacgcggcacatactcgcgcgcgccttggccgcactgccagcgactcag
catcatcatctctggaaagttgcaaaacgctggtgcgctatgcccgtcgtgcccagtgct
acagtgcgggctgtctggcggctttatctgtccttccagcgctcactgcattcgaaacgg
gagtactttcaggtgctcgtgcagaagggcgacttcaatgggttcctgcacgagtgcgtg
cacctggggctgcccaacaagtcgaataaaggcgccgtcgaggagcgtgacctgctcttg
agcgacatgagcttttgggagacggtgcagacggcactgcaggggaagggctggcgcttc
acaggcgatattggtcctctgcgtgagctggtcgctctcggaaagcggcggtgcgcctcc
ccggtcgagctctcaatggcctttgccgttttcctttacggccaggggcacatgcgagag
ggtcgacaggagctgcgccaactgctggacgaggcaccggaggcccagacgctgatctcg
ctttaccaccttgccgtggaggtggaagaccaactcgtggaatctttcgccgtggacccc
gatctcagacgcctcgacgacgccgcgtacaacggtgtggtgcagcatctcttcggtgac
ggcgacccactcagccacctcgagcgacttgcgcgcgagttcccactgctcctcaaccag
tcgcagctgcggaatagcccgcacaatgcgacactgtggctgaagcgtgtggagctggtg
caggaggacgtctacgcaggacgctccacctttgacgacctcgtcgatctttaccgccag
gctattcagcagtgcactgcaggtatgtcgcgtgtggacggcgcggcggcgcagctgttc
tcttcttgtgcccaggcccttattcgtggcggcaagctggacagcgccgtatcggtgctc
agtgagggcgcgtggtgcgtgccattcaccagtgccgcgctcaacgtgcagctcctcggt
cttcttgtggaggttcagctgatgtcggctgcctcgcccttgtcagtgcgggatgcgctc
gcggacagactgaccagcggtgctcgcagtggcgcttcaaagcgcagccgaaacgggctt
ctgcagtcgagtgcagccctgccccacgtagtgcaccacccacacacgtggatcatgtgg
tgtgacgtttgcgctgcctacgactcagccaacgcggccgcttggcgccgccttgtcgag
gcactcgccacctcgcccgccttctccgcggaagccgcctgctacgtggctcacaaggcc
tacgtctgtaggcaagagtccatggcagtcataatgctggagagggccgttgctgccacg
cggcagcagcctaccgcgcagctttttgtgctggagcagtacctctccttcctgtacctc
cgcgacggccgacaggtgccgctgcatcagttccgcgaagtgttcagtcttctgcagcaa
gtgaccccggttgccatacgcactgcaccgtctgccgtcatcgacctgcacgtcagctgc
gcttacatggaggcagcgatcggcctgtacgggacagctgtccgcatgatgcaggagatt
tccctagtcgctactgcagcgcttcgtgggcgtgatgagcacctccgtatcctgcaggcc
attcttgagcactctatcaccttcacggagcagcgcaggggctacgattcggtgcgcacg
tactgcggggttcttgttcagcgcctccagcacgcactcctgctgcagcgtgtggcgctt
cactgggccgcgatcgagaagcgctctggcaacacggcacaggcgcatcttatcctcgac
gcgtgcggcgacagccaggatccgtccacggagcatggcgaggtatactggcgactgtgg
gagtctctctgtacaagtgtggaggagttcgaaaaggtggctcggcgacgccagcaggca
ttgattcgcttcagcaaacgcgagaatgcgaagggggcggagtag
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