Leishmania mexicana: LMXM_24_0250
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Entry
LMXM_24_0250 CDS
T02288
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_24_0250
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_24_0250
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_24_0250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
13448903
NCBI-ProteinID:
XP_003875836
UniProt:
E9AWL4
LinkDB
All DBs
Position
24:53636..55453
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AA seq
605 aa
AA seq
DB search
MSEAEVQTEWSELPLDTRVLEALKDLAWKKPTAVQSACVPLALKGKDISIQSRTGSGKTG
AFVIPAVQRIITEREQRGNPRALPSPRVLIVVPSVELCEQTAEAAHVIAKYVQPRLVIDN
LTSGGAVTARRIQSAHIVITTAALLAKGCSQGTVTADTLQHVRFFVLDEADVVASMAERS
LRTVQSLLPPNMQVILASATLTKGVAAVKGQLLRHPVNVVLTSEDVEELVRSDGKDNAAS
QQGPVVESRVRVRDPLKKTLHQYYLVATDECHSHTLLFGLYRMALITGKTLIFVNDDEQT
YRLQNFLEQLGVATLAYDANLPINVRLDTLRRFQTGMASTLVCTDGTLENAMQLQASLEE
SQPGEKGSDGQSGSPSSRRRPRSASVCGRANTEAPSALHRGIDFAHVRNVVLFDGVEATD
PIALSRYTHRIGRAGRAGEEGVSIAIFTVPQARKYLRPLQEYCTERGDVIRPFRQMQRAE
VAKLQYRVDSVLGNITRTSTRKMRVASVAAELSRSSYLANHLSQKDTDALQRVMRRSSKR
IRVERNILEVPEYMHLSTAEDVGAYQRRVQAKQTQSNRLRKATQKASADPLKAVVSKLRS
SKRKA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagccgaagtacagacggagtggtctgagctgccgcttgacacgcgggtgctc
gaggccctgaaagacctagcgtggaagaagccgactgccgtccaaagtgcatgcgtgcca
ctcgccctcaaaggcaaagacatctccatccaatcccgcacgggctctggcaagaccggc
gcctttgtcatcccagccgtgcagcgcatcatcacggaacgggagcaacgcggcaatcct
cgagccctgcccagcccgcgtgtcctcattgtcgttccgtcggtcgagttgtgcgagcag
acggccgaggcggcgcatgtaatagccaagtatgtgcagccccggctggtcatcgacaac
ctcacgtctggaggcgccgtgacggcaagacgcattcagtctgcccacatagtcattacc
accgcggccctactggcgaaggggtgcagccagggcaccgtaacggccgacaccctccag
cacgtccgctttttcgtcctcgacgaggccgacgtggtggcctcgatggcggagcgatcc
ctgcgcacggtgcagtcgttgttgccaccgaacatgcaggtcattctagcttccgccacc
ctaaccaagggtgtcgcggccgtcaaaggccaactgctgcggcacccggtcaatgtggtg
ctcacgtcggaggacgtggaggagttggtgcgtagcgatggcaaggacaacgcagcctcg
cagcagggcccggttgtcgagtcccgtgtcagggtgagggacccactgaagaagacactg
caccagtactacttggtggccacggacgagtgccacagccacacgcttctctttggtctc
taccgcatggccctcatcaccggcaagacactcatcttcgtgaacgacgacgagcaaacg
tatcgtctgcagaatttcctggagcaactcggggtggcaacgctcgcgtacgatgcgaac
ctccccatcaacgtgcgactcgacactctgcgccgtttccaaactggtatggcgtccaca
ctcgtgtgcaccgatggcacactggagaacgcaatgcagctgcaggcttcgctggaggag
tcgcagccgggtgagaagggctcggacggtcagtctgggtcgccgtcatcgcggcgtcgg
ccgcgatcggcttccgtgtgtggtcgtgcgaacaccgaggcgccatcggcactgcaccgc
ggcatcgactttgcgcacgtgcgcaacgtcgttctgttcgacggggtggaggcgactgac
ccgatcgcgttgtctcgttatacccaccgcatcggccgcgccggtcgtgccggcgaggag
ggcgtgtccatcgcgatcttcactgtgccgcaggcccgcaagtatctgcgtccgctgcag
gagtactgcacagagcgcggcgacgtcattcggccgtttcggcagatgcagcgggcggag
gtggcaaagttgcagtaccgcgtggacagtgtgctgggcaacatcacgcgtacgtcgacg
cgcaagatgcgggtggcctccgtcgccgcggagctgagtcgtagctcgtacctggcgaac
cacctctcgcagaaggacacggacgccctgcagcgagttatgcggcggtcctcaaagagg
atcagggtggagcgcaacatcctcgaggtgccggagtacatgcatctgtcgacggcagaa
gacgtaggcgcgtaccagaggcgtgtgcaagccaagcagacgcagtcaaaccgtctgcgc
aaggcaacgcagaaggcttcagcagacccactgaaggcggtggtgtctaagctgcgctcc
tccaagcgcaaggcataa
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