Leishmania mexicana: LMXM_25_0430
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Entry
LMXM_25_0430 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
lmi
Leishmania mexicana
Pathway
lmi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LMXM_25_0430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_25_0430
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LMXM_25_0430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
WD40_RFWD3
PEP5_VPS11_N
Utp12
Beta-prop_IFT122_2nd
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_IFT140_2nd
Beta-prop_LRRK2
VPS8_N
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
13449093
NCBI-ProteinID:
XP_003876096
UniProt:
E9AXC0
LinkDB
All DBs
Position
25:complement(129221..132274)
Genome browser
AA seq
1017 aa
AA seq
DB search
MEGKNCFRTRWTQEPIFSGGALASLALPVSASAASSALSTSAALEECLIMACGDTVNVVR
ATSGEVLCRYTLPVEDVILHIDAVTVPEASDDDGKDAAGVDEGEAGTKRDASAAEKSATA
KKSPKKKARAGKTVKLNEGDEDNAVQAEKKVAVPSVVPSSSEAATSQDDRVLAAPAGSYV
AVGTRSLQVYVLRVDARVESPASPSSSPSGEKGAGADTGSEEGNAAEAKGGDADVVGTET
ATGTLVQYSIELQRNWTAAQHAISVVHFSQSGTYLVSGATDGSVKVWNVFHHHLTHNLVC
AHSSLVQSVCLDPSEAYLAVGSFEGHVTVFDFVTKRIVAAGRPHVQAVESMVFNDALTHV
YSIARDRRLALNKMMFSENRKSTELQEVRAIVVKEHVSSAAFESAGLLHVGAMDGVVSTY
RVSEAEAVQVVRRLPKPPAADAEDSAEEAFVRSLVVAGKPKGTGMRRLRGLVVHDAPHAP
DTSSLYVGDAGFNIQYLRPSSTERSQYEVTRTVVGFLDQLLDVKLFPEASPLHRAVVTNS
KDVRLYASDGCVSSQTLRGHSDVVLCCAVSSDGAWIATGAKDKEVRVWSTERCETVVRGV
GGHTAEVTSLSFNGRQTDTYLLLFSVSSDENLRLWDIGVPLAGRASAKQSRSRVEEIQHR
SGVNAAHAGPIYTVAVAPNDQYVATGGKDKSVNVWNITGKKMYREASLKGHRRGITSLAF
SPVDRVLASASNDGSVRLWSLVSLTCLKAMQVDRTSVLQLSFFNNGTQIVTTNAEGVLRV
WAIASSESVWAAEAHTEKIWALAVEERPSSGETIFYSGAADGVLIATEDYTAEEVARVKE
DRHTMILQEQALSNALRNGEFSEAFMLALRLSHPRHLRQVLVRWCAKDARQCENTLRGEL
LPALDAEQMTRLLQYTREWITNSRHCMVATLVLYVLISSRHFEAVAQVPSMASLIEPLLA
YTRKHSQRQHDLLRRTYYIDYVIRGLAPNVLTSLPPFVHHDEGRKEELPLAKRMRVE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaagaactgcttccgcacgcgatggacgcaggagcctatcttcagtggcggc
gcgttggcttctcttgcgcttccagtgtcagcctccgctgcctcgtctgcactttccacg
tcggccgctctagaggaatgcctcatcatggcgtgcggcgacaccgtgaacgtcgtgcgg
gcaacaagtggcgaggtgctatgcaggtacacgctgccagtagaggatgtgattctccac
attgacgccgtgacggtgcccgaggcgtcggatgacgacggcaaagacgccgcaggcgta
gatgagggagaggcggggacgaagcgcgacgccagcgcggcggagaagtcggccacggcg
aagaagtctcccaagaaaaaggccagggccggcaagacagtcaagctgaacgagggggac
gaggacaacgccgtccaagcggagaagaaggtagccgtgccatccgtggtgccgtcctca
agcgaggcggccacctctcaggacgacagggtgctcgctgcacctgctggcagctacgtt
gcggttggcacgcgctctctgcaggtctacgtgctgcgcgttgacgcccgcgttgagtcg
ccggcctcaccctcgtcctctccttcaggggagaagggtgccggtgcagacaccggttct
gaagaaggcaacgctgcagaggcgaaaggcggtgatgcggatgtagtcggcacggaaacc
gctaccgggactcttgtacagtactcgatcgagctgcagcggaactggacggcggcgcag
cacgccatctcggtcgtgcacttctcccagagtggcacctacctcgtttcgggtgccacg
gatggcagcgtgaaggtgtggaacgtttttcatcatcacctcacgcacaacttggtgtgc
gcccacagctcgctggtgcagagcgtctgcctcgaccccagcgaggcctacctcgccgtc
ggctcctttgagggacacgtcaccgtcttcgactttgtgacgaagcggatagtggcggcc
gggcggccgcacgtgcaggcggtcgagtccatggtcttcaacgacgcgctcacacacgtc
tactctatcgccagggatcgccgtctcgctctgaacaagatgatgttcagcgagaaccgc
aagtcgacggagctgcaggaggtgcgcgcgattgtggtgaaagagcacgtgtcgagcgcc
gccttcgagagcgccgggctacttcacgttggcgcgatggacggcgtggtctccacctac
cgcgtgagcgaggccgaggcggtacaggttgtgcgccggcttccaaagccgccggccgcg
gacgccgaggacagcgccgaggaagcgtttgtgcggtctctggtcgtggccggcaagcca
aagggcacgggcatgcgccgcctgcgcggattggtggtgcacgacgcgccgcacgcgccg
gacacctcctccttgtacgttggtgacgcgggattcaacattcagtacctgcgcccttca
tcgacggagcgcagccagtacgaggtgacccgcacggttgtcggctttctggatcagctg
ctcgacgtgaagctgttccctgaggcctcgccgctgcaccgggctgtggtaaccaacagc
aaagatgtgcgcctgtacgcttcagacggttgcgtctcctcgcagactctgcgcggccac
agtgacgtggtgctctgctgcgccgtgagcagtgacggggcgtggatcgccaccggggcc
aaggacaaggaggtgcgcgtgtggtcgaccgagaggtgcgagaccgtcgtgcgcggtgtt
ggcgggcacacagcggaggtgacatcgctgtcctttaacgggaggcagacagacacctac
ctgctgctcttctctgtctccagcgacgagaatctgcgcttgtgggacatcggcgtccct
ctggcggggcgtgcgtcggcaaagcagtcgcggtcccgtgtggaggagatacagcaccgg
agcggcgtgaacgcggcccatgcgggccccatctacaccgtggctgttgcgcccaacgac
cagtacgtcgcgactgggggcaaggataagtcggtgaatgtgtggaacatcacaggcaag
aagatgtaccgcgaggcctccttgaaggggcatcggcgtggcatcacatccctcgccttc
tcgccggtcgatcgcgtcctggcatcggcgtcgaatgacgggtcggtgcggctgtggtcg
ctggtgtcgctgacgtgcttgaaggcgatgcaggtggaccgcacgtcggtactgcagctg
agcttcttcaacaacggcacgcagattgtgacgaccaacgcggagggcgtgctgcgtgtg
tgggccatcgcgtcctcggagtcggtctgggcggcggaggcgcacacggagaagatatgg
gccttggcggtggaggagcgcccctcctcgggtgagacgatcttctactccggcgccgcc
gacggcgtgttgatcgcgaccgaggactacaccgccgaggaggtggcccgcgtcaaggag
gaccggcacacgatgatcctgcaggagcaggcgctctccaacgcccttcggaatggcgag
ttctcagaggcttttatgctggccctacggctgagtcacccgcgtcatctccgccaagtg
ctcgtgcgctggtgcgccaaggacgcgcgccagtgcgagaacacgcttcgcggcgagctt
ctgcccgcccttgacgcggagcagatgacgcggctgctgcagtacacgcgagagtggatc
acgaacagccgtcactgcatggtggctactctggtgctctatgtactcatctcctcacgc
cacttcgaggccgtcgcacaggtgccgtcgatggcgtcgctgatcgagccgctgttggct
tacacgcgcaagcacagccagcgccagcacgacctgcttcgacgcacgtactacatcgac
tacgtcatccgcggtcttgctccgaacgtgcttacctcgctgcccccgttcgtgcatcac
gatgaaggccggaaggaggagctgccgctggcaaagcgcatgcgcgtcgagtga
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