Leishmania mexicana: LMXM_25_0620
Help
Entry
LMXM_25_0620 CDS
T02288
Name
(RefSeq) RNA polymerase I second largest subunit,putative
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMXM_25_0620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_25_0620
Enzymes [BR:
lmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMXM_25_0620
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LMXM_25_0620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
13449231
NCBI-ProteinID:
XP_003876115
UniProt:
E9AXD9
LinkDB
All DBs
Position
25:complement(211177..216024)
Genome browser
AA seq
1615 aa
AA seq
DB search
MSSRSSHYSAKSLSSSAGESMVTSHSTVSSSRHRRTGAVCIHEPRAPPMKMTAMERLQHI
RNSITRLKYICERQYHTAALDQASEVSVTSFFERLRKKLSRLEFSRSHIGTPETGGPQQL
KYIAKEARQLMNTVQEVVRDTANTSATATCIYEGMQHHHMQEAMVELEELSALLAERPNE
QLSRVNVDLLADLVAFHIDEFDAFMTLRVEAFVREMQSEGAFYTGPVMTDASQKATPIGV
CSAVLLDVAVGVRPARSARIVLEHARHQITKVENRLHAADIALQECQLVGEVAAEGQQRQ
QAEVQRREFTIMKGRISHALRQLDRVQQAWLEEEQSIFTRAASGSHDLAALMQTKRLREA
EAIEEVQRLHDQTIHACLPFATPQYHRRYGETYGQPCHVRLGFHFLPDVNTAAEVAAAAG
STSAAAPSSLMLRTLSTEYFALMRQLRVAPADYDTYDYLVPSKEQFWVNFASFPEMVKGA
RCALRNVDARLDHFRALEEQKEVGGYFIMNGGERILRALLMQRCNVPINIYREKFVTQGP
HFSAKAVVIRCKRPSGLTAQNYFYYTTQGEVIFSFARKVVWHLPAPLLLSAMSTQSVSAV
ELQRLLTIGMPDGNHVARVEALLQHHRRKPYGDLRHFIDYITVLGRMYREYHQNSSAFHF
LPLYAKGATCQHDAWYGMFMLRRHVLPHLNSCDVATPDLAPDATAQKLLAWLSPALLAEL
DRKFDVMIAITRQLYLFIDGAVEHQGNDVPAYQELFTVSQVLIGAFEVCLNRYMRGFVYR
LARHLPAALFRRILTLRTLPPVDAGDTMRQVRQFAEFCGRHGGSDPLDQLARLLVTGNMN
LNREEDFYCPQTSGWVVMAEHLNFYRFFEQLRCVHRGKTIADMRSSEVRKYPCEAYGFIC
MVQSPDGEDCGVLNHLSLSTISSNSPDAAMTAQLREIVRKAVPGVRSRATHSTVVDQLCE
TVPVWMEGELLGYLSPADAAEAATTLRQLKALTLRSQVHVTGIVRRKDASPLQTLEVVYV
APKNKDPAGLYVFYDCGRLMRPVQRLESSVRKDATHLPFPLMFIGTWEQSWLDIAAVPSD
PLDAVMQLNRKYEYMEQNGTNLISLTSATIPFFEHNCSPRNLFQCGLSKQSSGTQLQALA
WRKEAKLFRTYCPQRYISRTLPMDYYGLDDVNLGVNAVIAVLAYTGYDMDDAVIINSTAA
QRGMLTAGVTVAKIVTASGKGSDKDDVFVFHNLLSTGERFTAELEANGLPPKRANASLDA
FSFDRDHKYPGLRDNNDVYCCAKRVERVDPFTNKSVYEYTRHHATKWRHFDKGEDAWVQQ
VIPLVYSGPDPTSVLMIFRIPRPPTVGDKFSSRHGQKGTLPLHIRSHDLPFATASGITPD
VIINPHAFPSRMTVGMVLEIMTAKVGAIEGRFIDHSAWSTVDEQPRVAELIGEALVKAGY
NRYGREHLIDGISGEEMKADVFMGICGYQRLRHMVSDKWQARARTDAHTYRAVTKTGQPV
KGRKRHGGVRVGEMERDGLLSHGISEVVVDRLLHVSDKTKAFICPRCGSLLSLYERHATE
YGTWRTCRFCGAGADESTDSIAMVEIPQVLRLWAAELTSIGIRVVLKTSELSDFI
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcgctcatcacactatagcgcgaagtcgctctcctcctcagcgggggagtcg
atggtaacgagccacagcactgtgtcctcgagccgtcaccgtcgcaccggcgctgtctgc
atccatgagccacgcgccccacccatgaagatgacggcaatggagcgcctgcaacacatc
cgcaactccattactcggctgaagtatatttgtgagcggcagtatcacaccgcagcgctt
gatcaggcgtccgaggtgtccgtcacgtcgttctttgagcgactccgcaagaaactgtcg
aggctcgagttcagccgtagccacatcggcaccccagagaccggcggcccgcagcagctg
aagtacattgcgaaggaggcgaggcagctcatgaacaccgtgcaggaggtggtgcgcgac
acggcgaacacttccgcgacggcgacatgcatttacgagggcatgcagcatcatcacatg
caagaggccatggtggagctggaggagctgtccgcgctcctggcagagcgccccaacgag
cagctgagtcgcgttaacgtcgatcttctggcggacctcgttgcttttcatatcgacgag
ttcgacgccttcatgacgctgcgtgtcgaggcatttgtgagggagatgcagagtgaaggc
gccttctacaccggccccgtcatgacggatgcgtctcagaaggctacgccaatcggtgtg
tgttcggcggtgctgctagacgttgcggtcggcgtgcggccagcgcggtcggctcgcatc
gtgcttgagcatgcgcggcatcagatcaccaaagtcgagaaccgtctgcacgctgcagac
atcgcgctgcaggagtgccagttggtgggcgaggttgctgcagagggtcagcaaaggcag
caggcagaggtgcagcgtcgcgagttcacgatcatgaaggggcggatcagccacgccctg
cgccagctggatcgtgttcagcaagcatggctggaagaggaacagagcatcttcactcgt
gccgcctccggtagccacgatcttgcggcgctgatgcagacaaagcgcctgcgcgaggcg
gaggcgattgaggaggtgcagcggctgcacgaccagacgatccatgcttgcctgcccttc
gccaccccgcagtatcaccgccgctacggtgagacgtacggccagccgtgccacgtccgc
ctcggcttccacttcttgccagatgtgaacacggcagccgaggtggccgccgctgctgga
tcgaccagtgccgcggcgccgtcgtcgctgatgctgcgcaccctttccacggagtacttt
gcgctgatgcgccagctgcgcgttgctcctgccgactacgacacctacgactaccttgtg
ccgagcaaggagcagttctgggtgaacttcgcgagcttcccggagatggtgaaaggggct
cgctgcgcacttcgcaacgtcgacgctcgcctcgaccacttccgcgcactggaggagcag
aaagaggtgggcggctacttcatcatgaacggcggcgagcgcattctgcgcgcgttgctc
atgcagcgttgcaacgtgccgatcaacatctaccgcgagaagttcgtcacgcagggcccg
cacttttccgccaaggctgtcgtcattcgctgcaagcggccaagcggactgacagcgcag
aactacttctactacacaacgcagggcgaggtgatcttctcgttcgcgcgcaaggtggta
tggcatctaccggcgccgctactgctgagcgcaatgagtacgcagagcgtgtcggcggtg
gagcttcagcggctgctgacgatcggcatgccagatggcaaccacgtcgcccgtgtcgag
gcactcctccagcaccaccgccgcaagccctacggtgatctgcggcactttatcgactac
atcacagttctcggccgcatgtaccgcgagtaccaccagaactcatctgcgtttcacttt
ctgccgctgtacgcgaagggtgcgacgtgccagcacgacgcgtggtacggtatgttcatg
ctgcgacgccacgtcctgccgcacttgaacagctgtgatgtggccacgccggatcttgcc
cctgacgccactgcgcagaagctgttagcgtggctgtcgcccgctcttctcgccgagctg
gaccgcaagtttgacgtgatgattgccatcactcggcagctgtacctcttcattgacggc
gctgtcgagcatcagggcaacgacgtcccggcgtaccaggagctcttcaccgtttcgcag
gtgctcattggtgccttcgaggtgtgcctgaaccggtacatgcgcggctttgtctaccgc
ctcgcacggcacctgcctgcggcgctctttcgccgcatcctcaccctgcgcactctgccc
cccgtcgacgccggggacaccatgcggcaggtgcgtcagtttgcggagttttgtggccgg
cacggtggcagcgacccgctcgatcagcttgcccgtctgctcgtgacgggcaacatgaac
ctcaaccgcgaggaggacttttactgcccgcagacgtctgggtgggtggttatggccgag
cacctgaacttctaccgcttctttgagcagcttcgctgcgtgcaccgtggcaagacgatc
gccgacatgcgttcgagcgaggtgcgcaagtacccgtgtgaagcgtacggctttatctgc
atggtgcaaagccccgacggcgaggactgtggcgtgctgaaccacctgagtctgtcgacc
atctcgtcgaactcaccggatgcggccatgacagcgcagctgcgggagatagtgcgcaag
gcggtgccgggcgtgcgcagtcgcgcgacgcacagcacagtggtggatcagctttgtgag
acggtgccggtgtggatggaaggcgagctgcttgggtacctcagcccggcagacgcggcg
gaggccgcgacaacgctgcgccagctcaaggcgctcacgctgcgctcgcaggtgcacgtg
accggcatcgtacgccgcaaggatgcgtcgcctctgcagacgctggaggtggtgtacgtg
gcaccgaagaacaaggacccggcgggcctgtacgttttctatgactgcggacgactcatg
cgtcccgtgcagcggctcgaatcgtcggtgcgcaaggacgcgacccacctccctttcccg
ctcatgttcattggcacctgggagcagagctggctggatatcgccgccgtcccgagcgac
cccctcgacgccgtcatgcagctgaaccgcaagtatgagtacatggagcagaacggcacc
aacctcatctccctcacctcagcgacgatccccttcttcgagcacaactgctcgccgcgc
aacctgttccagtgcggcctcagcaagcaatcttctggcacacagctgcaggcgctggcg
tggcgcaaggaggcaaagctgttccgcacctattgcccgcagcgctacatcagccgcacc
ctccccatggactactacggcctcgacgacgtgaacctcggtgtcaacgccgtgattgcc
gttctcgcctacaccggctacgacatggacgacgccgtcatcatcaacagcaccgctgcc
cagcgcggtatgctgacggccggtgtcacggtcgccaagattgtgacggcatccggcaag
ggctccgacaaggacgacgtcttcgtgttccacaacctgctctccacgggcgagcgattc
acggccgagctggaggcaaacgggctgccgccgaagcgcgcgaacgcgagcctggacgcg
ttctccttcgatcgagatcacaaataccctggactgcgagacaacaacgacgtgtactgc
tgcgccaagcgggtggagcgagtggacccgttcacgaacaagtctgtctacgagtacacg
cgtcaccacgccaccaagtggcgccacttcgacaagggcgaagatgcgtgggtccagcag
gtgattccgctcgtgtacagcgggccagacccgacatcggtgctcatgatctttcgcatc
ccgcgtccaccgaccgtgggcgacaagttctcgtcccgccacggccagaagggtacgttg
ccgctgcacatccgctctcacgacctgcctttcgccacggctagcggaataacgccggac
gtcatcatcaacccccacgcctttccgtcgcgcatgacggtcggtatggtgctggagatc
atgaccgccaaggtcggtgccatcgagggccgcttcatcgatcacagtgcgtggtcgacg
gtagacgagcagccgcgagtggcggagttgattggcgaagcgctggtcaaggcagggtac
aaccgctacggccgcgagcacctgatcgacggaatcagcggtgaagagatgaaggcggac
gtgttcatgggcatctgcgggtatcagcgtctgcggcacatggttagcgacaagtggcag
gcgcgggcgcgtacggacgcgcacacgtaccgggcggtaaccaagacggggcagccggtg
aagggccgcaagcgccacggcggcgtacgggttggggagatggagcgggacggcttgcta
tcgcacggcattagtgaagtggttgttgaccgtctccttcacgtgtcagacaagacaaag
gcattcatctgcccgcggtgcggtagcttgctctccctgtacgagcggcatgccactgag
tacggtacatggcgcacctgccgcttctgcggcgccggcgcagacgagagcaccgactcg
atagctatggtggagatcccacaagtgctgcggctgtgggcggcggagctgacgagcatt
ggcatccgcgtcgtgctcaagacgtcggagctgtccgactttatatga
DBGET
integrated database retrieval system
