KEGG   Leishmania mexicana: LMXM_25_1705
Entry
LMXM_25_1705      CDS       T02288                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
lmi  Leishmania mexicana
Pathway
lmi03018  RNA degradation
lmi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMXM_25_1705
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMXM_25_1705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmi03019]
    LMXM_25_1705
   03041 Spliceosome [BR:lmi03041]
    LMXM_25_1705
Messenger RNA biogenesis [BR:lmi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     LMXM_25_1705
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     LMXM_25_1705
Spliceosome [BR:lmi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    LMXM_25_1705
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 13449138
NCBI-ProteinID: XP_003876228
UniProt: E9AXQ2
LinkDB
Position
25:complement(665744..666139)
AA seq 131 aa
MLSQYLRKRVSVVTVDGRNLVGVLHAADQLLNIVLTSCVERTGAPYDFDDDASEEDNGGV
VDEDVSTAVRSGGTARNALPPLEEVQLGVMMLRGADVVSIAAIDVYEEAGTNVKDWRGRD
MPPATTVARSW
NT seq 396 nt   +upstreamnt  +downstreamnt
atgctctcccagtacctgcgcaagcgcgtctccgtggtgacggtagatggccgtaatctc
gtcggcgtactccacgcagccgatcagctgctgaacatcgtactcacgtcctgcgtcgag
cgcactggcgcaccgtacgacttcgacgatgacgcgtccgaagaggacaacggtggcgtg
gtcgatgaagatgtctccacggctgtccgcagcggtggcactgcacgcaatgcactgccg
cccctggaagaagtacaactgggcgtgatgatgctgcgcggtgccgacgtggtctccata
gctgccatcgacgtgtacgaggaggctggcacaaacgtgaaggattggcgaggacgggat
atgccgcctgccacgactgtagcgaggtcgtggtga

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