Leishmania mexicana: LMXM_25_1840
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Entry
LMXM_25_1840 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lmi
Leishmania mexicana
Pathway
lmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMXM_25_1840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_25_1840
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMXM_25_1840
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
LMXM_25_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Ntox17
Motif
Other DBs
NCBI-GeneID:
13449152
NCBI-ProteinID:
XP_003876242
UniProt:
E9AXR6
LinkDB
All DBs
Position
25:complement(711603..713546)
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AA seq
647 aa
AA seq
DB search
MSNIKKVQTEADRLLKKVNEGLDAYDELHEKLANAPNASAKERLEGDLKRELKKLQRHRE
AMKSFMQNDDYKEKAKMQVSRKKIEERMETFRAIEREMKTKAFSNEGLASAALERADSAT
EQWLKDAIEEGRKKIELLEYEVQKANNGRVRRGKQQQQQKSEYQIRLENLQTHFFKWESL
LRMVNNEELDADEVDDLQEPIQKVLEDDVDLEVMEDMSIYDSFDIPEPKVKPIVPFDVSD
YEDKKAQSPKTMAKAKTPTSTVQAKPSPFITSPKEMAASLPAAKAASSTPVPSSMQQPAP
AQAPPQQLLPPTANSPADDDIGEEEPVPEWMDDDMDTANDDTFGDDAMSGRFTIGSLAEM
ASATNKVTQDWEKSQKPIGSPEPKTVKVADPGHGAPEEKPKPTPPAAAPAPNAWERRAAE
QQSRQKAQQQQQQQQKHAPDAASPLVPSAPAAAAAEASAAEAVTTSLIAPAPATPPSTPV
GSANTDLIQPFPPIPGAAPGSKFTPKKIHELLDMSLGNLPHTLDVQRQRPYEPPNAIDAI
PYFPQEVLPVLSNKDVYHQMDLDTLFFIFYYHQKSYQQYFAAKELKARSYRYHTKQQRWY
QRLERPQTTTETEERGSYTFFDFEDKWDHDRIDDFLFEYKYLENELH
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacatcaagaaggtgcagacagaggcagaccgcctcctcaagaaggtcaatgag
ggcctcgacgcgtacgacgagctgcacgagaagctagcaaacgcgcccaacgcgagcgcc
aaggagcgcctcgagggcgatctgaagcgtgagctgaagaagctacagcgccaccgtgag
gccatgaagagcttcatgcagaacgacgactacaaggagaaggcaaagatgcaggtgtcg
cgcaagaagatcgaggagcgcatggagacatttcgtgcgatcgagcgagagatgaagacg
aaggccttcagcaacgaggggctcgcctccgccgcgctggaaagggcggactccgccacg
gagcagtggctgaaggacgcgatcgaggagggacgcaaaaagatagagctgctcgagtac
gaggtgcagaaggcgaacaatggccgcgtacgccgtgggaagcagcagcagcagcagaag
tccgagtaccagatacgcctcgagaacttgcagacccatttcttcaagtgggagtcgctg
ctacgcatggtgaacaacgaggagctcgacgccgatgaggtggatgaccttcaggagccg
attcagaaggtactcgaggacgacgttgatttggaggtgatggaggacatgtccatctat
gacagcttcgacataccagagccgaaggtaaagcccatagtgccctttgatgtcagcgac
tacgaagacaagaaggcgcaatcgccgaagacgatggccaaggccaagactccaacgtcc
acagtgcaggcgaagcccagcccgttcatcacctctccgaaggaaatggcggcgtcgctg
cccgcggccaaggcggcgtcctctacaccggtcccctcgtcgatgcagcaaccggcgccc
gcgcaagcgccgccgcagcagctgctgccccccaccgccaacagcccggcggacgacgac
attggtgaggaggagccagtgccggagtggatggacgacgacatggacaccgccaacgac
gacacctttggcgatgacgccatgagcggccggttcacgatcggctcgctcgccgagatg
gcctcggcgacgaacaaggtgacgcaggactgggagaagtcgcagaaacccatcgggtcg
ccggagcccaagacggtgaaagtggccgacccaggccatggagcaccggaggagaagccg
aagccgactccgcccgccgcggcaccggcgccgaacgcgtgggagcgacgcgccgccgag
cagcagagccggcagaaggcacagcagcagcagcagcagcagcaaaaacacgccccggat
gctgcctcgccgctggtgccgtccgcgccagccgctgcggccgccgaagcgagtgcggcg
gaggcggtgacaacctcgctgattgccccggccccagcgacgcctccgtcgaccccggtc
ggcagcgctaacacagacctcatccagccctttccgcccattcctggtgccgctcccggc
tccaagttcacgcctaagaagatccacgagctcttggacatgtctctcggtaacctgccg
cacacgctcgatgtgcagcggcagcgcccctacgagccgccgaacgcgatcgatgcaatc
ccgtacttcccgcaggaggtgctgccggttctgtcgaacaaggacgtctaccatcagatg
gacctcgacacgctattcttcatcttctactatcaccaaaaatcgtaccagcagtacttt
gccgccaaggagctcaaggcccgctcctaccgctaccacacgaagcagcagcggtggtac
cagcggctggagcggccgcagacgacgacagagacggaggagcgcggctcgtacaccttc
tttgactttgaggacaagtgggaccacgaccgcatcgacgactttctcttcgagtacaaa
taccttgagaacgagcttcactga
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