Leishmania mexicana: LMXM_27_0050
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Entry
LMXM_27_0050 CDS
T02288
Name
(RefSeq) DEAD-box helicase-like protein
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmi01009
]
LMXM_27_0050
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_27_0050
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_27_0050
Protein phosphatases and associated proteins [BR:
lmi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
LMXM_27_0050
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_27_0050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
13449753
NCBI-ProteinID:
XP_003876579
UniProt:
E9AYQ7
LinkDB
All DBs
Position
27:complement(<12457..>14823)
Genome browser
AA seq
788 aa
AA seq
DB search
MSSYVSVSGLSVVGEDDALQRLLSSRDGSGSGSNALLDAMRKIQAENVFDEENVTVAPAA
QSAPLAKAASKKESSASHASVEKPKANAVSLREPKKISSGMSLSPTVQLAASAIQTSSFR
ATNPTDIDSLPALVELVHPKLLRPLTESMKIENLTRIQKLCWAAMLDSDSDVLVRSETGS
GKTLAYALPTLHRLLVECDKTPISRDVGTLIIIMCPTRELVLQVTETVTTLVRCAQFITV
GGIHGGENRHKEKARLRKGIPILVTTPGRLLDHLKTTASFTVAHAQTVIMDEADRLLDMG
FEKALREIMELLEKKCHHASGLKRVLVSATITDGVERLSHFALRRNIARIGETQDTFSVP
TTLKQHYVMVPVKHRLSVLLSFLRSQLDAGANKIIVFVSTADSTEFLYLLASRLQSPFHK
RSYEGKVITRSRGASMSTKKMVETANRHLDTGSATDEVVTFEDVSDDEREGDARLDSAAA
LQRAFLDANVFKLHGNMSQVDRAAVFHAFKFGTRKSRSDKSVLFCTDVAARGLDMPKIDW
IVHYDPPTDPKSYVHRIGRTARIGNSGDSILFLAPDERGYAAYLTHFIHSQIQQSDSKEA
AEMSERKYETFLFYLTKLDPKSNHMWMQSAAVLERAISRLAMQRDVERGEDAKESLYRVA
LFAYQSYLRAYAGMPKQTKSLFFSSPLHLGHAAQSFGIDKSPSEVQRELQVYIREDRALA
RDNRKGTVTNSRDGEGGKRKRQRVELDHEDRYHSMLTQKQRKLTRDWAEKRRKESTKIRP
LQFSEFDA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctacgttagtgtttccggcttatcggtggttggcgaagatgacgcccttcag
cgtctcctgtcgtctcgtgacggctctggaagcggatccaacgccctcttagacgcgatg
cgcaagattcaagcagagaacgtgttcgacgaggagaatgtcactgtcgccccggcggca
cagtcagccccacttgcgaaagcggcgagcaagaaggaaagttctgcgtcccacgcatct
gtcgagaaaccgaaagccaacgctgtgtctttgcgagagccaaagaagatctcgtcagga
atgtccctctcaccgactgtgcagttagcggcctctgccattcagacctccagctttcgc
gcaaccaatccaaccgacatcgattctctccccgcacttgtggagctggtgcatccaaaa
ctgctccgcccgttgacggagtccatgaagatcgagaacctcacccgtatccagaaactg
tgctgggcggcaatgctcgacagcgacagcgacgtcctggtgcgcagcgagactggcagc
ggcaaaacgctcgcctacgccctccccacccttcaccgccttctcgtggagtgcgacaag
acacccatctcgcgcgacgtgggcaccctcatcattatcatgtgcccgacccgcgagctt
gtgctgcaggtgacagagacggtgaccactcttgtgcgctgcgcgcagttcatcacagtc
ggaggcatccatggcggcgagaaccgacacaaagaaaaggcgcggcttcgcaaaggcatc
cccattctggtgacgacgccgggccggctgctcgatcacctcaagaccacggcttctttc
accgttgcccacgcgcaaacggtgatcatggacgaggcggaccgtctgctcgacatgggg
tttgaaaaggctctgcgtgagattatggagctgctagagaaaaagtgccaccatgcgtct
ggtctcaagcgcgttctagtctcagcaaccatcacagacggtgttgagcgactgtcgcac
tttgcactgcgcaggaacattgcccgcatcggcgagacacaagacaccttctctgtcccg
acaacgttgaagcagcactacgtgatggtgccggtgaagcatcgtctctccgtccttctc
agctttcttcgctcccagctggatgccggtgctaacaagatcatcgtgtttgtctcgacg
gcggacagtacggagttcctgtacctgctcgcctctcgtctacagtccccatttcacaag
aggtcgtacgagggcaaagtaatcacgcgctcgcgcggtgcttccatgagtacaaagaaa
atggtcgaaaccgccaaccgccacctcgacaccggcagcgccacggacgaggtggtcaca
tttgaggatgtgagtgacgacgagagggaaggggatgcgagacttgacagcgccgcggcg
ttacagcgcgcttttctggacgctaacgttttcaagctgcacggcaacatgtcacaggtg
gacagggccgccgtctttcacgccttcaagtttggcactcgcaagtcccgcagcgacaag
agcgtgttgttctgcacggacgtggctgcccgtggcctcgatatgccgaagattgactgg
attgtgcattacgaccctccaacagaccccaaaagctacgtgcatcgaatcggtcgcacg
gcgcgtatcggcaacagcggcgactcgattctttttctcgcaccggatgagcgtggctac
gcggcatacctgacgcacttcatccactcgcagatccagcagagcgacagcaaggaggcg
gcggagatgtcggagcgcaagtacgagacatttctcttctaccttaccaagctggatccc
aagtcgaaccacatgtggatgcagagcgcggctgtgctggagcgtgccatctcacgcctt
gcgatgcagcgtgacgtcgagcgtggtgaggacgccaaggagagtctttaccgcgttgcg
ctcttcgcgtatcagtcgtacctgcgtgcctacgcgggcatgccaaaacaaacgaagtcg
ctcttcttctcctccccgctgcaccttggccacgccgcgcagagcttcggcatcgacaag
agtccatcggaggtgcagcgggagctacaagtctacatccgcgaagaccgcgcccttgcc
cgtgacaaccgaaagggcaccgttaccaactcacgcgacggggagggaggaaaaaggaag
cgccagcgagtggagttggaccacgaggaccgctaccacagtatgctcactcagaagcag
cgcaagctgacgcgcgactgggccgagaagaggcgcaaagagagcaccaagattcggccg
ctacagttctccgagttcgacgcgtga
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