Leishmania mexicana: LMXM_27_0380
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Entry
LMXM_27_0380 CDS
T02288
Name
(RefSeq) putative nucleoporin
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lmi
Leishmania mexicana
Pathway
lmi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LMXM_27_0380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_27_0380
03036 Chromosome and associated proteins [BR:
lmi03036
]
LMXM_27_0380
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
LMXM_27_0380
Chromosome and associated proteins [BR:
lmi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
LMXM_27_0380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
13449715
NCBI-ProteinID:
XP_003876612
UniProt:
E9AYU0
LinkDB
All DBs
Position
27:102876..107519
Genome browser
AA seq
1547 aa
AA seq
DB search
MNAFGGGFNQSKPGGFGQQAQPPQAAFGQQPQAGGFGQQPPQQVGGFGQQTSGFGQPAQP
QSGFGQAGMSQAAGGFGQAQQQPVTGFGQQPQGSGFGQQTGGFGQQSQQQQGGFGQAAAG
PQAGIFGQQPPQQMSGFGQQPQQQIGGFGLQPATTMGGFGQQPQQAGGFGQQSQQQQGGF
GQAAAGGFGAGRGGAGFGAAGGFNQPAAQGGGFGASQPAVNAFGRPQQAQGGFGTQATAG
AQFGGGQGTGGFGTAPQGSFGSQQPAPGGFGQQTATGGFGQSAAPGGFGTAQQTAAGGFG
AGRGTTGFGGPQATVGGFGAGRGATGFGQAAQGGFGAQPPAAGGFGQVQPQASGFGAPQT
TAGGFGQPAQGGFGSGASQTITGGGFGGAQQQQPQGSAGGFGAQPGAAGGFGQATGGFGA
QQPAAGGFGQAAPGGAFGQQSQPAAGGFGAGRGTTGFDVGGGFRGSQQQAQPAAGGFGAP
KGAAGGFGQASGGGFGQAASGFGAQQPKPGGFGQAAPATGFGQAAPATGFGQAAPATGFG
QAAPATGFGQPAPATGFGAQPPAAGGFGHAPAAAALANAPATGAGVNVGRPTDLAFMSLP
DYNATPYGNVLLFDSYERPQAVKKTAKTTDDDLKPVVPPARRAMHTWMVTQMRVPDENTL
MKQVPASLASSALSPVALKEMLVPAVQLGSAAAGEPAGAQKRVTHDLPRRPSPTTVDAPN
VNAAVPRCTDPEYTLEPSLAQLATYTPEELRRVSRFSISRLDGSCEVRFLEPVNLVRVDV
ASVVHLGSDGHVALYPDGDAPPLSSGLNVRAEVRVRDPTGEAMEDIARYCAESRARFVGH
RQGCCVYRLNDNSAAAGASRGVLGQDSSDTAPLSIIHDEDEHSHDLDRSSDGSEEEDTSD
VRSVEQPQAATGSGGALAIANAEVRTYTVPPPPATRKPVVERRMALASAADFDLPYVLPD
MSVKSKCEPFSVKLGTSRRTAEPRVYYVRAQESVIQRTYVNHPPRLQPSERTIRGMLARS
VRASWSTAGSVAFPSHAELRDGAEAAGAVPEVMGACAVAATPFHWHKPAHKALTQCAVAL
LRLFLQHTDVTEDAACPLASIHLHRNKSHNTLSAEKLKVASSVIESVISAAGKASLSRVE
LLSTRQTCTVISLLSALYALPEADAAVPNAMEEARYLTQLRHRNLAGWLKTELAAFLDSS
ATRAVKLSPAEELVQAMLCHRLREARASAQSVANAELARVVRVCGEGNQFGGYIEMAKSG
FKDGEEVRQRVVSLLSGKVEPFIRDEEYTGLQEDSAEVRATPTAATWKQLLGIFTFYGCV
PDTPAEDIIHAFLERLRAPSSRKLNPLPPYAERVDTAALRTHRGKDVVRRGNTFQDAALL
LLEGFANGSAPPAACLHPHASSYSGADYLTAFVIVTALRAVQVPREQAYRDAELSVLLGM
TAELECNDETWFWGLLPLHMIESPANRLDAVRAFCKRNAMRASAQKQVGEPQADYVRLVS
LMRVNEGWLEPVVAPPEEERSATENMPSVKTHAALERALAKLAIEAW
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtttggtggcggtttcaaccagagcaaacctggtggctttggccagcaggcc
caaccaccgcaggcggcattcggccagcagccgcaggcaggaggctttggacaacagccg
ccgcagcaggtcggcggcttcggccagcagacgagtggatttggccaaccggctcaacca
caaagcggatttggccaggcgggtatgtctcaagcagcgggcggttttggtcaggcgcag
cagcagccagtcaccggcttcgggcagcaaccgcagggtagtggattcgggcagcagacg
ggtggatttggccagcagtcgcagcagcagcaaggcggctttggccaagcggcggcaggg
ccacaggctgggatctttggccagcaaccgccgcagcagatgagtggctttggtcaacag
cctcagcagcagatcggcggattcggcctgcagcccgccactactatggggggctttggg
cagcagccgcaacaggcaggtggattcgggcagcagtcgcagcagcagcaaggcggattc
ggacaggcggcagctggtggcttcggtgcggggcgaggcggcgctggcttcggtgcggct
ggcggctttaatcagccagcagcgcagggcggagggtttggtgcttctcagcctgccgtg
aatgcctttgggcgaccacagcaagcgcagggtggatttggtacccaggccactgctggt
gctcagttcggcggcggacaggggacgggtggctttggcactgctcctcagggcagcttc
ggctcacagcagccggcacccggtggctttggtcaacagacggctaccggtggcttcggc
cagtccgcggcaccagggggcttcggcactgcacaacagactgctgctggcgggttcggt
gctggacgcggcactaccggctttggcgggccgcaggccaccgtcggtggcttcggcgcc
ggccgcggggccaccggcttcggacaggctgcgcagggtgggttcggtgcgcagccgcca
gccgccggtgggtttggacaagtgcagccgcaggcatccggcttcggagcaccgcagacg
acggccgggggctttgggcaacctgctcagggcggctttggcagcggtgcttcccaaacc
attactggtggtggatttggcggggcccagcaacaacagccgcagggttcggccggcggg
ttcggagctcagcccggtgccgcaggcggcttcggacaggccaccggtggctttggagct
cagcagccagctgctggcgggttcggccaagcggcgccgggcggcgcctttggccagcag
tcgcagcccgccgcgggcgggtttggcgcaggccgcggcaccaccggcttcgatgtcggg
ggcggctttcgcggctcacagcaacaggcgcagcccgccgcaggtggatttggggccccg
aaaggcgcggcaggtgggtttgggcaggcctctggtggcggatttggtcaggcagcgagc
ggctttggtgcccagcagccgaaacctggcggcttcggtcaagcagcccccgccactggt
ttcggccaggctgcccccgccactggtttcggccaggctgcccccgccactggttttggc
caggctgcccccgccactggtttcggtcagcctgcccctgccaccggcttcggcgctcag
ccgccggccgctggcggctttgggcatgcgcccgctgcagcagcacttgccaatgcgccg
gccactggtgctggcgtgaacgtgggccgtcccactgacttggcgttcatgtcccttcct
gactacaacgcaacgccgtatggcaacgtgctgctcttcgactcatacgagcggcctcag
gcggtcaagaagacggcgaagacgactgacgatgacttgaagcccgttgttcctccagcc
cgtcgggcgatgcacacctggatggtgacgcagatgcgggtgcctgacgagaacacgttg
atgaagcaagtgccagcgtccctcgcctcgagcgctttgtcgccagtggcgctgaaggag
atgctggtccctgcggtgcagctcggcagcgccgcggcaggagagcccgccggggcgcag
aagcgggtgacgcacgacttgccacggcggccgtcgcctacgaccgtggatgcgccgaac
gtcaacgccgccgttccacggtgcaccgaccccgagtataccctggagcccagcctcgct
cagctggccacctacacccccgaggagctccgccgcgtctcacgcttcagtattagtcgt
ctcgacggctcgtgtgaggtacgctttctggagccggtgaacctggtgcgcgtcgacgta
gcctcggtggtgcacctcggcagtgacgggcacgttgcattgtaccctgacggcgacgcc
ccgcccttgtcgagcgggttgaacgtgcgagccgaggtgcgggtgcgcgaccccactggc
gaggccatggaggacatcgcccgctactgcgcggaatcgcgcgcccgcttcgtgggtcac
cggcaggggtgttgcgtctaccgcctgaacgacaacagcgccgcggctggcgcgtcccgt
ggggttcttgggcaggattcaagcgacaccgccccgctctccatcatccacgacgaggat
gagcactcgcacgacctcgaccgctcgagtgacggcagcgaggaggaagacacgtccgac
gtgcgcagcgtcgagcagccacaggcggccactggtagtggaggcgcactggcgattgcc
aatgctgaagttcgcacgtacacggtgccgccgccaccggcgacgcgaaagccagtggtg
gagcggcgcatggcactggcttcggctgctgacttcgatctgccgtacgtcctgccggac
atgagcgtgaagagcaagtgcgagccgttctccgtgaagttgggcacatcacgccgcacg
gctgagccgcgcgtgtactacgtacgcgcgcaggagtcggtcatccagcgcacgtacgtc
aaccatccaccgcggttgcagccctcggagcggactattcgcggcatgctagcgaggagc
gtgcgagccagctggagcaccgccggcagcgttgcattcccgtcgcacgccgagttacgc
gacggggcggaggcggctggcgcggtaccagaggtgatgggcgcctgcgccgttgcggcc
actccgtttcactggcacaaaccggcccacaaagcgctcacccagtgcgctgtggcgctg
cttcgcctgtttctgcagcacaccgacgtgacagaggacgcggcgtgtccgctggcgtcg
attcatctccaccgcaacaagagccacaacacgctctcggcggagaagctgaaggtggcg
tccagtgtcatcgaaagcgtgatctcggcagcgggcaaggcatctctctctcgcgtagag
ctgctctccacgcggcagacctgcaccgtcatctcccttctctccgccctctacgccctg
cctgaggcggacgccgcggtcccgaacgcgatggaggaggcgcggtaccttacgcagctg
cgccatcgcaacttggctggttggctgaaaacggagctcgctgccttcctcgacagctcc
gctacgcgtgcggtgaagttgtcccctgcggaggaactggtgcaggctatgctgtgccac
aggcttcgcgaggcccgtgcctccgctcagtcggtcgcgaacgcggagctggcgcgggtg
gtgcgcgtgtgcggggaggggaaccagtttggcgggtacatcgagatggcgaagagcggg
ttcaaggacggtgaggaggtgcgtcagcgtgtcgtgagcctcctctccggtaaggtggaa
cccttcatccgtgatgaggagtacacgggtctgcaggaagactcggccgaggtacgtgcg
accccgacggcggccacgtggaagcagctgctgggcatcttcaccttctacggctgtgtc
ccggatacgcccgccgaggacattattcatgccttcctcgagcggctgcgcgcaccgtcg
tcgcgcaagctcaatcctctacctccgtacgccgaacgcgttgacaccgcagcgctgcgg
acgcaccgtgggaaagatgttgtgcggcgcggcaacaccttccaagatgctgcgctgctg
ctcttggagggattcgccaacggatcggctcccccagctgcctgcctgcacccccacgcg
tcgagctactcgggcgccgactacctcactgccttcgtgattgtgactgcgctccgcgct
gtccaagtaccgagggagcaagcctacagagatgcggagctgtcggtgcttctcggcatg
acggcagaactcgagtgcaacgacgagacgtggttctggggcctccttcctctgcacatg
atcgagtcgcccgccaaccgtctcgacgccgtgcgcgcgttttgcaagcgcaacgccatg
cgtgccagcgctcagaagcaggttggcgagccccaggcggattacgttagattagtaagc
ctgatgcgtgtgaacgagggctggttggagccggttgtcgcccctccagaggaggaaagg
agtgctacagagaacatgccgagcgtaaagacgcacgccgccctcgagagggcactggca
aagctggcgatagaggcgtggtaa
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integrated database retrieval system