KEGG   Leishmania mexicana: LMXM_27_0380
Entry
LMXM_27_0380      CDS       T02288                                 
Name
(RefSeq) putative nucleoporin
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
lmi  Leishmania mexicana
Pathway
lmi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LMXM_27_0380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lmi03019]
    LMXM_27_0380
   03036 Chromosome and associated proteins [BR:lmi03036]
    LMXM_27_0380
Messenger RNA biogenesis [BR:lmi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     LMXM_27_0380
Chromosome and associated proteins [BR:lmi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    LMXM_27_0380
SSDB
Motif
Pfam: Nup96 Nucleoporin2
Other DBs
NCBI-GeneID: 13449715
NCBI-ProteinID: XP_003876612
UniProt: E9AYU0
LinkDB
Position
27:102876..107519
AA seq 1547 aa
MNAFGGGFNQSKPGGFGQQAQPPQAAFGQQPQAGGFGQQPPQQVGGFGQQTSGFGQPAQP
QSGFGQAGMSQAAGGFGQAQQQPVTGFGQQPQGSGFGQQTGGFGQQSQQQQGGFGQAAAG
PQAGIFGQQPPQQMSGFGQQPQQQIGGFGLQPATTMGGFGQQPQQAGGFGQQSQQQQGGF
GQAAAGGFGAGRGGAGFGAAGGFNQPAAQGGGFGASQPAVNAFGRPQQAQGGFGTQATAG
AQFGGGQGTGGFGTAPQGSFGSQQPAPGGFGQQTATGGFGQSAAPGGFGTAQQTAAGGFG
AGRGTTGFGGPQATVGGFGAGRGATGFGQAAQGGFGAQPPAAGGFGQVQPQASGFGAPQT
TAGGFGQPAQGGFGSGASQTITGGGFGGAQQQQPQGSAGGFGAQPGAAGGFGQATGGFGA
QQPAAGGFGQAAPGGAFGQQSQPAAGGFGAGRGTTGFDVGGGFRGSQQQAQPAAGGFGAP
KGAAGGFGQASGGGFGQAASGFGAQQPKPGGFGQAAPATGFGQAAPATGFGQAAPATGFG
QAAPATGFGQPAPATGFGAQPPAAGGFGHAPAAAALANAPATGAGVNVGRPTDLAFMSLP
DYNATPYGNVLLFDSYERPQAVKKTAKTTDDDLKPVVPPARRAMHTWMVTQMRVPDENTL
MKQVPASLASSALSPVALKEMLVPAVQLGSAAAGEPAGAQKRVTHDLPRRPSPTTVDAPN
VNAAVPRCTDPEYTLEPSLAQLATYTPEELRRVSRFSISRLDGSCEVRFLEPVNLVRVDV
ASVVHLGSDGHVALYPDGDAPPLSSGLNVRAEVRVRDPTGEAMEDIARYCAESRARFVGH
RQGCCVYRLNDNSAAAGASRGVLGQDSSDTAPLSIIHDEDEHSHDLDRSSDGSEEEDTSD
VRSVEQPQAATGSGGALAIANAEVRTYTVPPPPATRKPVVERRMALASAADFDLPYVLPD
MSVKSKCEPFSVKLGTSRRTAEPRVYYVRAQESVIQRTYVNHPPRLQPSERTIRGMLARS
VRASWSTAGSVAFPSHAELRDGAEAAGAVPEVMGACAVAATPFHWHKPAHKALTQCAVAL
LRLFLQHTDVTEDAACPLASIHLHRNKSHNTLSAEKLKVASSVIESVISAAGKASLSRVE
LLSTRQTCTVISLLSALYALPEADAAVPNAMEEARYLTQLRHRNLAGWLKTELAAFLDSS
ATRAVKLSPAEELVQAMLCHRLREARASAQSVANAELARVVRVCGEGNQFGGYIEMAKSG
FKDGEEVRQRVVSLLSGKVEPFIRDEEYTGLQEDSAEVRATPTAATWKQLLGIFTFYGCV
PDTPAEDIIHAFLERLRAPSSRKLNPLPPYAERVDTAALRTHRGKDVVRRGNTFQDAALL
LLEGFANGSAPPAACLHPHASSYSGADYLTAFVIVTALRAVQVPREQAYRDAELSVLLGM
TAELECNDETWFWGLLPLHMIESPANRLDAVRAFCKRNAMRASAQKQVGEPQADYVRLVS
LMRVNEGWLEPVVAPPEEERSATENMPSVKTHAALERALAKLAIEAW
NT seq 4644 nt   +upstreamnt  +downstreamnt
atgaacgcgtttggtggcggtttcaaccagagcaaacctggtggctttggccagcaggcc
caaccaccgcaggcggcattcggccagcagccgcaggcaggaggctttggacaacagccg
ccgcagcaggtcggcggcttcggccagcagacgagtggatttggccaaccggctcaacca
caaagcggatttggccaggcgggtatgtctcaagcagcgggcggttttggtcaggcgcag
cagcagccagtcaccggcttcgggcagcaaccgcagggtagtggattcgggcagcagacg
ggtggatttggccagcagtcgcagcagcagcaaggcggctttggccaagcggcggcaggg
ccacaggctgggatctttggccagcaaccgccgcagcagatgagtggctttggtcaacag
cctcagcagcagatcggcggattcggcctgcagcccgccactactatggggggctttggg
cagcagccgcaacaggcaggtggattcgggcagcagtcgcagcagcagcaaggcggattc
ggacaggcggcagctggtggcttcggtgcggggcgaggcggcgctggcttcggtgcggct
ggcggctttaatcagccagcagcgcagggcggagggtttggtgcttctcagcctgccgtg
aatgcctttgggcgaccacagcaagcgcagggtggatttggtacccaggccactgctggt
gctcagttcggcggcggacaggggacgggtggctttggcactgctcctcagggcagcttc
ggctcacagcagccggcacccggtggctttggtcaacagacggctaccggtggcttcggc
cagtccgcggcaccagggggcttcggcactgcacaacagactgctgctggcgggttcggt
gctggacgcggcactaccggctttggcgggccgcaggccaccgtcggtggcttcggcgcc
ggccgcggggccaccggcttcggacaggctgcgcagggtgggttcggtgcgcagccgcca
gccgccggtgggtttggacaagtgcagccgcaggcatccggcttcggagcaccgcagacg
acggccgggggctttgggcaacctgctcagggcggctttggcagcggtgcttcccaaacc
attactggtggtggatttggcggggcccagcaacaacagccgcagggttcggccggcggg
ttcggagctcagcccggtgccgcaggcggcttcggacaggccaccggtggctttggagct
cagcagccagctgctggcgggttcggccaagcggcgccgggcggcgcctttggccagcag
tcgcagcccgccgcgggcgggtttggcgcaggccgcggcaccaccggcttcgatgtcggg
ggcggctttcgcggctcacagcaacaggcgcagcccgccgcaggtggatttggggccccg
aaaggcgcggcaggtgggtttgggcaggcctctggtggcggatttggtcaggcagcgagc
ggctttggtgcccagcagccgaaacctggcggcttcggtcaagcagcccccgccactggt
ttcggccaggctgcccccgccactggtttcggccaggctgcccccgccactggttttggc
caggctgcccccgccactggtttcggtcagcctgcccctgccaccggcttcggcgctcag
ccgccggccgctggcggctttgggcatgcgcccgctgcagcagcacttgccaatgcgccg
gccactggtgctggcgtgaacgtgggccgtcccactgacttggcgttcatgtcccttcct
gactacaacgcaacgccgtatggcaacgtgctgctcttcgactcatacgagcggcctcag
gcggtcaagaagacggcgaagacgactgacgatgacttgaagcccgttgttcctccagcc
cgtcgggcgatgcacacctggatggtgacgcagatgcgggtgcctgacgagaacacgttg
atgaagcaagtgccagcgtccctcgcctcgagcgctttgtcgccagtggcgctgaaggag
atgctggtccctgcggtgcagctcggcagcgccgcggcaggagagcccgccggggcgcag
aagcgggtgacgcacgacttgccacggcggccgtcgcctacgaccgtggatgcgccgaac
gtcaacgccgccgttccacggtgcaccgaccccgagtataccctggagcccagcctcgct
cagctggccacctacacccccgaggagctccgccgcgtctcacgcttcagtattagtcgt
ctcgacggctcgtgtgaggtacgctttctggagccggtgaacctggtgcgcgtcgacgta
gcctcggtggtgcacctcggcagtgacgggcacgttgcattgtaccctgacggcgacgcc
ccgcccttgtcgagcgggttgaacgtgcgagccgaggtgcgggtgcgcgaccccactggc
gaggccatggaggacatcgcccgctactgcgcggaatcgcgcgcccgcttcgtgggtcac
cggcaggggtgttgcgtctaccgcctgaacgacaacagcgccgcggctggcgcgtcccgt
ggggttcttgggcaggattcaagcgacaccgccccgctctccatcatccacgacgaggat
gagcactcgcacgacctcgaccgctcgagtgacggcagcgaggaggaagacacgtccgac
gtgcgcagcgtcgagcagccacaggcggccactggtagtggaggcgcactggcgattgcc
aatgctgaagttcgcacgtacacggtgccgccgccaccggcgacgcgaaagccagtggtg
gagcggcgcatggcactggcttcggctgctgacttcgatctgccgtacgtcctgccggac
atgagcgtgaagagcaagtgcgagccgttctccgtgaagttgggcacatcacgccgcacg
gctgagccgcgcgtgtactacgtacgcgcgcaggagtcggtcatccagcgcacgtacgtc
aaccatccaccgcggttgcagccctcggagcggactattcgcggcatgctagcgaggagc
gtgcgagccagctggagcaccgccggcagcgttgcattcccgtcgcacgccgagttacgc
gacggggcggaggcggctggcgcggtaccagaggtgatgggcgcctgcgccgttgcggcc
actccgtttcactggcacaaaccggcccacaaagcgctcacccagtgcgctgtggcgctg
cttcgcctgtttctgcagcacaccgacgtgacagaggacgcggcgtgtccgctggcgtcg
attcatctccaccgcaacaagagccacaacacgctctcggcggagaagctgaaggtggcg
tccagtgtcatcgaaagcgtgatctcggcagcgggcaaggcatctctctctcgcgtagag
ctgctctccacgcggcagacctgcaccgtcatctcccttctctccgccctctacgccctg
cctgaggcggacgccgcggtcccgaacgcgatggaggaggcgcggtaccttacgcagctg
cgccatcgcaacttggctggttggctgaaaacggagctcgctgccttcctcgacagctcc
gctacgcgtgcggtgaagttgtcccctgcggaggaactggtgcaggctatgctgtgccac
aggcttcgcgaggcccgtgcctccgctcagtcggtcgcgaacgcggagctggcgcgggtg
gtgcgcgtgtgcggggaggggaaccagtttggcgggtacatcgagatggcgaagagcggg
ttcaaggacggtgaggaggtgcgtcagcgtgtcgtgagcctcctctccggtaaggtggaa
cccttcatccgtgatgaggagtacacgggtctgcaggaagactcggccgaggtacgtgcg
accccgacggcggccacgtggaagcagctgctgggcatcttcaccttctacggctgtgtc
ccggatacgcccgccgaggacattattcatgccttcctcgagcggctgcgcgcaccgtcg
tcgcgcaagctcaatcctctacctccgtacgccgaacgcgttgacaccgcagcgctgcgg
acgcaccgtgggaaagatgttgtgcggcgcggcaacaccttccaagatgctgcgctgctg
ctcttggagggattcgccaacggatcggctcccccagctgcctgcctgcacccccacgcg
tcgagctactcgggcgccgactacctcactgccttcgtgattgtgactgcgctccgcgct
gtccaagtaccgagggagcaagcctacagagatgcggagctgtcggtgcttctcggcatg
acggcagaactcgagtgcaacgacgagacgtggttctggggcctccttcctctgcacatg
atcgagtcgcccgccaaccgtctcgacgccgtgcgcgcgttttgcaagcgcaacgccatg
cgtgccagcgctcagaagcaggttggcgagccccaggcggattacgttagattagtaagc
ctgatgcgtgtgaacgagggctggttggagccggttgtcgcccctccagaggaggaaagg
agtgctacagagaacatgccgagcgtaaagacgcacgccgccctcgagagggcactggca
aagctggcgatagaggcgtggtaa

DBGET integrated database retrieval system