Leishmania mexicana: LMXM_27_0550
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Entry
LMXM_27_0550 CDS
T02288
Name
(RefSeq) putative replication factor C, subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
lmi
Leishmania mexicana
Pathway
lmi03030
DNA replication
lmi03410
Base excision repair
lmi03420
Nucleotide excision repair
lmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMXM_27_0550
03410 Base excision repair
LMXM_27_0550
03420 Nucleotide excision repair
LMXM_27_0550
03430 Mismatch repair
LMXM_27_0550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmi03032
]
LMXM_27_0550
03036 Chromosome and associated proteins [BR:
lmi03036
]
LMXM_27_0550
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_27_0550
DNA replication proteins [BR:
lmi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LMXM_27_0550
DNA Replication Termination Factors
ELG1-RFC complex
LMXM_27_0550
Chromosome and associated proteins [BR:
lmi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LMXM_27_0550
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LMXM_27_0550
Check point factors
HRAD17(Rad24)-RFC complex
LMXM_27_0550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
AAA_16
Mg_chelatase
DNA_pol3_delta
AAA_assoc_2
RuvB_N
AAA_24
AAA_19
AAA_11
AAA_30
nSTAND3
AAA_5
RNA_helicase
AAA_25
DEAD
AAA_18
AAA_14
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
13450099
NCBI-ProteinID:
XP_003876628
UniProt:
E9AYV6
LinkDB
All DBs
Position
27:212381..213463
Genome browser
AA seq
360 aa
AA seq
DB search
MSTVNTPWVEKYRPQTVADIVGNTEAISRLQVIAKEGNLPNLLLCGPPGTGKTTSMLCLA
RDLLLQSTDAGSAGASPGGATKDILKDAVLELNASDDRGLDVVREKIKLFAQTKKTLPKK
FFSTGEGVAKDDHVVHLHKIVLLDEADSMTPAAQQALRRTMELHSSTTRFAFACNNSSKI
IEPIQSRCAVVRFKKLSDADILKRLVYVIQQENVSYTDDGLEALLYLAEGDLRQALNALQ
ATHTGYGLVNADNVFKVCDQPHPLLVENVITACVMKRNIEEAHREMNRLLNRGYAPVDVI
ATFFKVVQTNARLFRSELQQLEVLKIVGETTMRIAEGVGTPLQLAAMLARMIAAVENNPS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaacacgccgtgggtggagaagtaccgcccgcagacggtggcggacatc
gtcggtaacacggaagccatttcgcggttgcaagtgatcgcgaaggagggcaacttgccc
aacttgcttctctgtggacctcctggcaccggtaagacgacaagtatgctctgcctcgcg
cgcgacctgttgcttcagagcaccgacgctggaagcgcaggggcgtcgccgggtggagcc
acgaaggatatcctcaaggacgcggtactcgagttgaacgccagcgacgatcgcggattg
gacgtggtacgtgaaaagatcaagctctttgcccagacgaagaagacgctgcccaagaag
ttcttctctacaggcgaaggcgtcgccaaggatgaccacgtggtgcacctccacaagatt
gtgctgctggatgaggcggatagtatgaccccagctgcgcagcaggcgttgcgtcgcacc
atggagctgcacagcagcacgacgcggtttgcctttgcgtgcaacaatagcagcaagatc
attgagcccatccagtcccgctgcgctgtcgtccgattcaagaagctcagtgatgcggac
atcttgaagcggctcgtgtacgtcatccagcaggagaacgtctcctacacagatgacgga
ctggaagcgctactgtacctcgccgaaggcgacctgcggcaggcactgaatgccctccag
gccacacacacgggctacggactcgtgaatgctgacaatgtcttcaaggtgtgcgatcag
ccgcatccgctgctcgtggaaaacgtcatcacggcgtgcgtcatgaagcgcaacattgag
gaggcgcaccgagagatgaatcgcctgctcaaccgcggctacgcccctgtcgacgtgatt
gcgacctttttcaaggtcgttcagacaaacgcgcgcctttttcgcagtgagctgcagcag
ctggaagtgctgaaaatagtgggcgaaacgacgatgcgaatcgcggagggtgtgggcact
ccgctgcagctggccgcgatgctcgcacgcatgattgccgccgtggagaacaacccgtca
tag
DBGET
integrated database retrieval system
