Leishmania mexicana: LMXM_27_1130
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Entry
LMXM_27_1130 CDS
T02288
Name
(RefSeq) putative intraflagellar transport protein IFT88
KO
K16474
intraflagellar transport protein 88
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmi03037
]
LMXM_27_1130
Cilium and associated proteins [BR:
lmi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
LMXM_27_1130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_1
TPR_2
TPR_19
TPR_12
TPR_6
TPR_8
TPR_14
TPR_7
ARM_TT21_5th
TPR_CcmH_CycH
TPR_11
ANAPC3
TPR_9
TPR-S
TPR_17
ARM_TT21_N
HAT_PRP39_C
DUF7823
TPR_10
TPR_EMC2
Sel1
ARM_TT21_4th
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
13449616
NCBI-ProteinID:
XP_003876688
UniProt:
E9AZ16
LinkDB
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Position
27:complement(458802..461237)
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AA seq
811 aa
AA seq
DB search
MNGNDEDIYAAFQTPDIVSNPWTTNTNPFEAPAQEAMAGNPLMQAPPSQWGRAGMGSAWG
LPGSRMGTRGCGILGAARPMTSNRAVGFNSASTGAAAALFDPTGQACMANMAMGPAPPLK
KRSENSQEEELAEMEKQVNRLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGL
AEQINVDLTYAVHFNLAVQYQNHQLYTEALNTYNLIIRNVQFPQAGRLRVNMGNIYLAQQ
NYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSYETVVEGNGDANA
TFNLILCYYALGETEKMKRTFTRLMNCRLAGLDDEEDFEEEEKRKDVLVDDSLSRMCKER
RARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRTYEMRDPTSHVASELEMCKNLNYLK
HKRYQEAINGLKEFEKKDRSLRARAATNLAYLYFLEGDYENGEQYSDLSLVANQYNAKAL
VNKGNFSFVKKDYEKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRMFKRVQAL
VDSSEVLYQIADLSDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYY
LEAYRYYQVNMDVISWLGAYFVKNEVYDKAVQFFERASHIQPQEVKWQLMVASCHRRRGD
YAQAKLLYEQVHRKYPDNIECLNYLVQLCKDAGLNEEANEWFKATKKVERQQFHSSSSSV
GGESGDDDLESSVEGGNNINGHHRRRTSGTAAPDTAVAGRRAGGGAVADKDFSVGLSDDD
IVDGKAKQNGAKRLKKAKSSDSDDEIDLPGI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcaacgacgaggatatctacgcggcgttccagacgccggatattgtgtcgaac
ccatggacgacgaacacgaaccccttcgaggcccctgcgcaggaggctatggctggcaac
cccctcatgcaggcccctccttcgcaatgggggcgcgctggcatgggctccgcctggggt
ttgccgggcagccgcatgggtacaaggggctgtggtatcctcggcgccgcgcgtcccatg
acgtctaaccgcgccgtcggcttcaacagcgcaagcaccggcgccgctgccgccctcttc
gatcccactggccaggcgtgcatggcgaacatggcgatgggcccggccccgccactgaag
aagcggagcgagaacagtcaggaggaggagctggccgagatggagaagcaggtgaacagg
ctgatcgaggagagcgccatgcttgctctgcagaaggactacggcgcggcactcgagaag
gccaaggatgccggaaagttggagcggtcactctgtaaaaagcgcgagcagtacgggctc
gccgagcagatcaacgtcgaccttacttacgcagtgcacttcaacttggcggtccagtac
caaaaccaccagctgtacactgaggccctcaacacgtacaacctcatcattcgaaacgtg
cagtttccgcaagccggccgcctgcgggtaaacatgggcaacatctatcttgcgcagcag
aactacctcctagccattaagatgtaccgcaaggtgctcgacgagacgccgaccgccggc
aaggagctccgctaccacctctgccgcaatatcgccaacgcgtttgtgaagctgggccag
tacagggacgccgcgaacagctacgagaccgtggtggagggcaacggggatgccaacgcc
acgtttaacctcattttgtgctactacgcgctgggcgagacggagaagatgaaacggacc
ttcacgcgcctcatgaactgccgcctcgcgggcctcgacgacgaggaggactttgaggag
gaggagaagcggaaagacgtcttggtagacgacagcctgagccgcatgtgcaaggagcgc
cgcgccagatacctcaagtacatcatcacagcagcccgcttgattgcgccagtgctgcac
aaggactggtgtgtcggctacgactacatcatctctcagctgcgtacctacgagatgcgc
gacccgacctcgcacgtggcgagcgagctggagatgtgcaaaaacctgaactacctcaag
cacaagcgctatcaggaggcgatcaacggcctgaaggagttcgagaagaaggacaggagc
ctgcgagcacgggcagccacgaacctggcatacctctacttcctcgagggcgactacgag
aacggggagcagtacagcgacctgagtctcgtcgcgaatcagtacaacgccaaggcgctg
gtaaacaagggcaacttctccttcgtcaagaaggactacgagaaggcgaaggagctgtac
aataaggcgctggcggtggaggccgacaacgtggaggccatctataaccttggcttggcc
gccaagaagctagggctgtacgaggaggcggtgcgcatgttcaagcgcgtgcaggcgctc
gtggacagtagcgaggtgctgtatcagattgccgacctcagcgaccttgtcggcgacccg
tcggcgctggagtggtttaaccgtctcattggccgcgttccgacggacccgaacgcgctg
gcccgcatcggctccctctacgcccgcgacggcgacgatgtgcaggcgtttcactactac
ctggaggcctaccgctactaccaggtaaacatggacgtcatctcctggctcggcgcatac
ttcgtgaagaacgaagtctacgataaggcggtgcagttcttcgagcgcgcttcgcacatc
caaccgcaggaggtgaagtggcagctgatggtggcctcgtgccaccgccgccgcggcgac
tacgcgcaggcgaagcttctctacgagcaggtacaccgcaagtatcctgacaacatcgag
tgtctcaattacttggtgcagctatgcaaggacgctggcctcaatgaggaggccaacgag
tggttcaaggcaacgaaaaaggtggaacggcagcagttccacagcagcagcagcagcgtc
ggcggcgagagcggcgacgacgacttagaatcctccgtcgagggcgggaacaacatcaac
ggtcaccatcgcagacgcacaagcggtacggctgcacccgacacggcagtcgcaggccgc
cgcgcaggtggtggtgctgtggctgacaaagacttttctgtcggcctctccgacgacgac
atcgttgacggcaaagcaaagcagaatggcgccaagaggctgaagaaggcgaagagcagc
gactcagatgatgaaatcgacctgcctggcatttag
DBGET
integrated database retrieval system
