Leishmania mexicana: LMXM_28_0470
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Entry
LMXM_28_0470 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lmi
Leishmania mexicana
Pathway
lmi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LMXM_28_0470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_28_0470
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
LMXM_28_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_IFT140_1st
WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
13450541
NCBI-ProteinID:
XP_003876879
UniProt:
E9AZK7
LinkDB
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Position
28:complement(147674..150064)
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AA seq
796 aa
AA seq
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MQSCFAACSQVVCVAEDTAVAFYAPKSLRKFLVERLNGSRVCGMYVQSTSGAKAVLHVID
AEATLFEFAIEGGAPSLARTVSIRLPPASPLPSTSAGESEEVADRRHQGSTSRTVNGEAA
DTASVVMAAHFHVQQGQLFAVMLTKAGVYEAALGSASPMGATSAPSAVVVHTFKEAVPHG
YLSVGQFTGLVVVAVPHAHEFFYSLFTDRLSAHQPHRPSCPPLLPRAVNVQIQSVSCSPM
SMSVAVGGRRGELLIYVEVQEPHCFADHWHHTPLTALAFALDGSAVYTGGRESVLLIWDL
VSYSHKKVKVQLGTLQGITPFNSGGAQLLLSCGTSTLAVADLLQMRVATTAEGIEWAAED
VCTGLVVEQWRGSPAVILTGMPNVLRVCDPYTQQSIYSLHVSSQMETIPSPPRHGIQFVG
ILNDSRSLVTYESFSSTVLPPLLRFWEYDMPHKRHVETQTVYSPHRSAVLALEVDKRGRR
VFTLSSEAMKCWAQTAFTAQDTYGTPTGGWHNHSTMATPSQQVQTMALSADSSLCFVADD
CLHVYSVQDCRPGERWSLVQLLPQYTETQPLRRIVVSPDCRHAVAAGKRHIFFWTLHTCA
EEPTVFSVDESCITALSAFTDTTVIAALEDTSLVELRCCAAGSSKGPQLGEVVRRIANAS
RFPLRHIAPLHMNGQRLAAVDAVTGFKILQLPTGAAAVAQPSVYEWAGTSDAASGAGAVA
EGDKAARLQLQSFFKEITSIQDSQEVLMTASKEGALATAQQTAQADQWLAEVLGEPAYTV
PPMSVILSTYLQRRPY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctgcttcgccgcctgttcgcaggtagtctgtgtggcagaggacaccgcggtg
gcgttttatgcgcccaagtcgctgcggaagttcctcgtggagcggctcaacggatcccgc
gtgtgcgggatgtatgtgcagagcacttctggcgccaaggcggtgctgcacgtcatcgat
gccgaggctacgttgttcgagtttgcaatcgagggtggcgcgccatctttggcgcgcact
gtctcgattcgactcccaccggcctcacctctcccgtccacatcagctggagagagtgag
gaagttgcagataggcggcatcagggctcaacgagccggacggtgaacggtgaggcggcc
gacaccgcctccgtcgtcatggctgctcacttccatgtgcagcagggacagctctttgct
gttatgctcacgaaagccggcgtttacgaggccgcgctaggctccgcctcacccatgggg
gcgacgagcgcgccgtcggcggtggtggtgcacaccttcaaggaggccgtaccgcacggg
tatctttctgtcggccagtttactggcctggtcgttgtagccgtcccgcacgcgcatgag
tttttctactccctcttcacggaccgcctgtccgctcaccagccgcaccgcccgtcctgt
ccgcccctcctgccgcgcgccgtaaatgtgcagatccagagtgtttcctgcagcccaatg
agcatgtcggtcgctgttggtggcaggcgcggtgagctgctcatctacgtggaggttcaa
gagccacactgctttgccgaccactggcatcacacacccctgacagcgcttgcctttgct
ctagatggcagcgcagtctacactggcggccgcgagtctgtgctgctaatctgggatctg
gtgtcctacagtcacaagaaagtcaaggtgcagctgggcacgctgcaaggcataacgccc
ttcaacagtggaggggcgcagctgttgctgtcatgtggcacgtcgacgctcgccgttgcg
gacttgctgcagatgcgtgtggcaacgacggcggagggcatcgagtgggccgctgaggat
gtgtgcaccgggctcgtcgttgagcagtggcgcgggagcccggctgtgattctgacgggg
atgccaaatgtgctgcgcgtctgcgacccgtacacgcagcagtctatctactcgctccac
gtgtcctcgcagatggagacgatcccgagcccgccccgccatggaattcagttcgttggc
attctgaacgacagccgctctctcgtgacgtacgagtccttctcctcgacggtgcttccc
ccgctgctgcgcttttgggagtatgacatgccacataagcggcatgtggagacgcagacc
gtctactccccgcatcgctccgccgtgctagctctggaggtggacaagcgagggcggcga
gtgttcacgctgagctccgaggcgatgaagtgctgggcacagactgccttcaccgcacag
gacacatacggcaccccgactggcggctggcacaaccactccacgatggcgaccccctcc
cagcaggtgcagacaatggccctttccgcggacagctcgctctgcttcgtggcggatgac
tgtctgcacgtgtattcggtgcaggactgcaggcccggcgagcgctggtcactggttcaa
cttttgccgcagtacacggaaacgcaaccgctgcgcaggatagtcgtgtcacccgactgc
cggcacgccgtggcagctgggaaacggcacatcttcttttggacactgcacacgtgtgca
gaggagccgaccgtattcagcgtggacgagtcatgcattactgccttgagcgccttcacg
gacacgacggtgatagccgccctcgaggacacatcccttgtggagcttcgctgctgcgcc
gccggcagcagtaagggcccacagctgggtgaggtggtgcgccgtattgcgaacgcctct
cgcttccctttgcgccacatcgccccactgcacatgaatggccagcgtctcgctgctgtg
gacgctgtgacgggcttcaagattttgcagctgcctacaggagccgcagctgtggcgcag
ccctccgtgtatgaatgggccggcaccagcgacgcagcgagcggcgcgggtgccgtggca
gagggcgacaaggccgcacgccttcagctgcagtccttcttcaaggagataacctcaatc
caagactcacaggaggtgctaatgacagcgagcaaagaaggcgccttggcaacagcgcag
cagacggctcaggcggatcagtggctggctgaggtactgggtgagccggcctacacggtg
ccgccgatgagcgttattctgtccacgtacctgcagcgtcggccgtactag
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