KEGG   Leishmania mexicana: LMXM_28_0470
Entry
LMXM_28_0470      CDS       T02288                                 
Name
(RefSeq) hypothetical protein
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lmi  Leishmania mexicana
Pathway
lmi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LMXM_28_0470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lmi03009]
    LMXM_28_0470
Ribosome biogenesis [BR:lmi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    LMXM_28_0470
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 WD40_CDC20-Fz Beta-prop_IFT140_1st WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_HPS5
Other DBs
NCBI-GeneID: 13450541
NCBI-ProteinID: XP_003876879
UniProt: E9AZK7
LinkDB
Position
28:complement(147674..150064)
AA seq 796 aa
MQSCFAACSQVVCVAEDTAVAFYAPKSLRKFLVERLNGSRVCGMYVQSTSGAKAVLHVID
AEATLFEFAIEGGAPSLARTVSIRLPPASPLPSTSAGESEEVADRRHQGSTSRTVNGEAA
DTASVVMAAHFHVQQGQLFAVMLTKAGVYEAALGSASPMGATSAPSAVVVHTFKEAVPHG
YLSVGQFTGLVVVAVPHAHEFFYSLFTDRLSAHQPHRPSCPPLLPRAVNVQIQSVSCSPM
SMSVAVGGRRGELLIYVEVQEPHCFADHWHHTPLTALAFALDGSAVYTGGRESVLLIWDL
VSYSHKKVKVQLGTLQGITPFNSGGAQLLLSCGTSTLAVADLLQMRVATTAEGIEWAAED
VCTGLVVEQWRGSPAVILTGMPNVLRVCDPYTQQSIYSLHVSSQMETIPSPPRHGIQFVG
ILNDSRSLVTYESFSSTVLPPLLRFWEYDMPHKRHVETQTVYSPHRSAVLALEVDKRGRR
VFTLSSEAMKCWAQTAFTAQDTYGTPTGGWHNHSTMATPSQQVQTMALSADSSLCFVADD
CLHVYSVQDCRPGERWSLVQLLPQYTETQPLRRIVVSPDCRHAVAAGKRHIFFWTLHTCA
EEPTVFSVDESCITALSAFTDTTVIAALEDTSLVELRCCAAGSSKGPQLGEVVRRIANAS
RFPLRHIAPLHMNGQRLAAVDAVTGFKILQLPTGAAAVAQPSVYEWAGTSDAASGAGAVA
EGDKAARLQLQSFFKEITSIQDSQEVLMTASKEGALATAQQTAQADQWLAEVLGEPAYTV
PPMSVILSTYLQRRPY
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgcagagctgcttcgccgcctgttcgcaggtagtctgtgtggcagaggacaccgcggtg
gcgttttatgcgcccaagtcgctgcggaagttcctcgtggagcggctcaacggatcccgc
gtgtgcgggatgtatgtgcagagcacttctggcgccaaggcggtgctgcacgtcatcgat
gccgaggctacgttgttcgagtttgcaatcgagggtggcgcgccatctttggcgcgcact
gtctcgattcgactcccaccggcctcacctctcccgtccacatcagctggagagagtgag
gaagttgcagataggcggcatcagggctcaacgagccggacggtgaacggtgaggcggcc
gacaccgcctccgtcgtcatggctgctcacttccatgtgcagcagggacagctctttgct
gttatgctcacgaaagccggcgtttacgaggccgcgctaggctccgcctcacccatgggg
gcgacgagcgcgccgtcggcggtggtggtgcacaccttcaaggaggccgtaccgcacggg
tatctttctgtcggccagtttactggcctggtcgttgtagccgtcccgcacgcgcatgag
tttttctactccctcttcacggaccgcctgtccgctcaccagccgcaccgcccgtcctgt
ccgcccctcctgccgcgcgccgtaaatgtgcagatccagagtgtttcctgcagcccaatg
agcatgtcggtcgctgttggtggcaggcgcggtgagctgctcatctacgtggaggttcaa
gagccacactgctttgccgaccactggcatcacacacccctgacagcgcttgcctttgct
ctagatggcagcgcagtctacactggcggccgcgagtctgtgctgctaatctgggatctg
gtgtcctacagtcacaagaaagtcaaggtgcagctgggcacgctgcaaggcataacgccc
ttcaacagtggaggggcgcagctgttgctgtcatgtggcacgtcgacgctcgccgttgcg
gacttgctgcagatgcgtgtggcaacgacggcggagggcatcgagtgggccgctgaggat
gtgtgcaccgggctcgtcgttgagcagtggcgcgggagcccggctgtgattctgacgggg
atgccaaatgtgctgcgcgtctgcgacccgtacacgcagcagtctatctactcgctccac
gtgtcctcgcagatggagacgatcccgagcccgccccgccatggaattcagttcgttggc
attctgaacgacagccgctctctcgtgacgtacgagtccttctcctcgacggtgcttccc
ccgctgctgcgcttttgggagtatgacatgccacataagcggcatgtggagacgcagacc
gtctactccccgcatcgctccgccgtgctagctctggaggtggacaagcgagggcggcga
gtgttcacgctgagctccgaggcgatgaagtgctgggcacagactgccttcaccgcacag
gacacatacggcaccccgactggcggctggcacaaccactccacgatggcgaccccctcc
cagcaggtgcagacaatggccctttccgcggacagctcgctctgcttcgtggcggatgac
tgtctgcacgtgtattcggtgcaggactgcaggcccggcgagcgctggtcactggttcaa
cttttgccgcagtacacggaaacgcaaccgctgcgcaggatagtcgtgtcacccgactgc
cggcacgccgtggcagctgggaaacggcacatcttcttttggacactgcacacgtgtgca
gaggagccgaccgtattcagcgtggacgagtcatgcattactgccttgagcgccttcacg
gacacgacggtgatagccgccctcgaggacacatcccttgtggagcttcgctgctgcgcc
gccggcagcagtaagggcccacagctgggtgaggtggtgcgccgtattgcgaacgcctct
cgcttccctttgcgccacatcgccccactgcacatgaatggccagcgtctcgctgctgtg
gacgctgtgacgggcttcaagattttgcagctgcctacaggagccgcagctgtggcgcag
ccctccgtgtatgaatgggccggcaccagcgacgcagcgagcggcgcgggtgccgtggca
gagggcgacaaggccgcacgccttcagctgcagtccttcttcaaggagataacctcaatc
caagactcacaggaggtgctaatgacagcgagcaaagaaggcgccttggcaacagcgcag
cagacggctcaggcggatcagtggctggctgaggtactgggtgagccggcctacacggtg
ccgccgatgagcgttattctgtccacgtacctgcagcgtcggccgtactag

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