Leishmania mexicana: LMXM_28_0530
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Entry
LMXM_28_0530 CDS
T02288
Name
(RefSeq) RAD50 DNA repair-like protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lmi
Leishmania mexicana
Pathway
lmi03440
Homologous recombination
lmi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMXM_28_0530
03450 Non-homologous end-joining
LMXM_28_0530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmi03032
]
LMXM_28_0530
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_28_0530
DNA replication proteins [BR:
lmi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
LMXM_28_0530
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
LMXM_28_0530
BRCA1-C complex
LMXM_28_0530
NHEJ (non-homologous end-joining)
MRX complex
LMXM_28_0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
ABC_tran
Rad50_zn_hook
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
13450389
NCBI-ProteinID:
XP_003876886
UniProt:
E9AZL4
LinkDB
All DBs
Position
28:complement(177970..182052)
Genome browser
AA seq
1360 aa
AA seq
DB search
MTSIEKLQLCGVRSFDPNPANQQFIQFQKPLTVILGKNGAGKTTIIEALLNACTGAMPPG
SGTEKGSFVYDPKVVGETEVKAQIRLIFTGKGGKLMQVIRSFQATRSAHRVTFTTLDNTV
AFQDLATGEVVSSTYRASDVDRVVPEMLGVSPAVLEHVIFCHQEECNWPLGPPKDVKRIF
DDIFAATRYVLALDRLRDNSKEFRRQLKEHEASLMALREHREQAKQLEQQIAQKESVVKA
IQDRSIGIEPELRGLRQAREALRTVEEQIETLQREVAVTNGRLEERREAVRRMGVPATSQ
TLEDLLEMRGSFTAQMQQLEEGLVHDTKRHDTAAARRRAQEEEMYKCRSNVQLLEREAQL
HKQNVARLRELIQHLSNEYVLSEGNIDERSLQRLLQKAEEAVAVERRRARTTSEGIQQRI
RDAEDGVQGSSRAVDGCNKEIEMREHAVENVRRRMKENAAAIAALGGDGCRGQLRQVQVE
VEELQQRVAATEELRKKGSGGHQSQRIIMELEEQNSTVAELREEMMQQKLLERQQQDLVL
LRQQIDESSAAVAAALQRDVLPILHEVGVQVPQEAAADSLSLTTLTSLRSQAAQVRQLKA
EELSALQTRALELEKACALQEQKMSYSADELAQCRRAVDAGTRQCAGLFPDMDAYEGVLL
QAREAAETAVQKRHALEALASCYHDFMVVAKEEKTCAVCERPFDSDDSLESFLTRKADRQ
RTSPEALAAVQATVTAAQEAYQSLEKLQSVVVTVRQNRHRIPVLEVELNALEDKMKQSCA
EQREVCATRDAAQHVVHQLDTMYQHLCMVCTMGEKTVALRDTLARKEKDFEAAQAEQQQQ
ETQRKGGSGDGATARAEPPQRSYEELCEAYAAATERLHKLNRQFTEAQRMERGQDENAAE
RELQERKAAMLQAEVAVAKLEDLEAAVRELQEEAAQHRTRVEELKRQAAEAQRSVEAHQQ
RVLQLRAEFQKTEAAERGALDTAETQLRELQLSLPPVLRYVQNGCARQLEELRVHLHETE
SAYKAAAQEEEGLASRMKEARETLSDQHRRSADMDRHIDVLQQEASIAADEAHLAETERT
LASLKSDRLQEVEQLLGKEARQASLATLREMITAKITSLEKIRAQQDGNTEAMLLDVNQL
KQQLRGDKYQNIEKRYRSTFLKVQTTEISIQDIEKYYSALEKAVQSYHQEKIAQINQIIA
ELWRQTYRGSDVDTVEIRSETEGTTTTAARRSYNYRVVMKRGNNEMDMRGRCSAGQKVLA
SIIIRLALSEAFCCDCGILALDEPTTNLDDDNARSLADALRTLIQARRAVKHFQLVVITH
DEQFVRALGGQSLEKFYYVLKDREGAFSVIDERTFDQLFA
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcatcgagaagttgcagctctgtggcgtgcgcagcttcgacccaaacccggcg
aatcagcagttcattcagtttcagaagccgttgacggtcattctgggcaagaatggtgct
ggcaaaacgaccatcatcgaggcgctgctgaacgcgtgcacgggggccatgcctcccggc
agtgggaccgagaagggctcctttgtgtatgatcccaaggtggttggcgaaacagaggtc
aaagcgcagattcgactgatattcaccggcaagggcggtaagctgatgcaggtcatccgc
tcctttcaggccacacgcagtgcgcaccgtgtcacttttacaacactggacaacactgtc
gcgttccaggacttggccaccggggaggtggtctcgagcacgtaccgcgccagcgatgtc
gaccgtgtcgtgccggaaatgctcggcgtgtctcccgctgtgctggagcacgtcattttt
tgtcaccaggaagagtgcaactggccactgggtccaccgaaggatgtgaagcgcatcttc
gacgacatcttcgctgcgactcggtacgtcctggcactggaccggctgcgcgacaacagc
aaggagtttcgccgccaactgaaagagcacgaggcgagcctgatggcgctacgggagcac
cgcgagcaggcaaagcagctggagcagcaaatagcgcagaaggaaagcgttgtgaaagcc
attcaggaccgcagcatcggcatcgagccagagctacggggcctgcgccaggcgcgcgag
gcgctgcgtacggtggaggagcagatcgagacattgcagcgtgaggtggcggtcacgaac
gggcgtctcgaagaacgtcgcgaggcagtgcgccggatgggtgtaccagccacgagccag
acgctagaggatctgctcgagatgcgcggcagcttcaccgcgcagatgcagcagctggaa
gagggtctcgtgcacgacacaaagcgccacgatacggccgcggcgcggcgacgcgctcaa
gaggaggagatgtacaagtgccgatcaaacgtgcagctgctggagcgtgaggcgcagctg
cacaagcaaaacgtggcgcggcttcgtgagcttatccagcacctgtctaacgagtacgtt
ctgagtgagggcaacattgacgagcgcagtctgcagcgtctgctccaaaaggcggaggag
gccgtggcggtggagcgtcggcgtgctcgcactacctcagagggtattcagcagcgcatt
cgagacgcggaggacggcgtgcagggcagttcccgcgctgtggatgggtgcaacaaggag
atagagatgcgcgagcacgccgtggagaatgtgcgacgccgcatgaaggagaacgccgct
gccatcgcggcccttggtggggatgggtgccgtgggcagctgcgccaggtgcaggtggag
gtggaggagctgcagcagcgtgtcgctgccaccgaagagttgcggaagaaaggtagtggg
ggacaccaaagccagcgcattatcatggagctagaggagcagaatagcaccgtggctgaa
ctgcgcgaggagatgatgcagcagaagctgctggagcgccagcagcaggatctagtgctg
ctgcgccagcagatcgatgaatccagtgcggccgtggcggcggcgctgcagcgagacgtg
ctcccgattttgcacgaagtcggcgtacaagttccgcaggaggcggctgctgactccttg
tcattgacaaccctaacgtctttgcgctcccaagccgcccaggtacggcagctgaaggcg
gaggagttgagtgctctccagacacgcgcgctagagctggagaaggcgtgcgccttgcag
gagcagaagatgtcctacagcgccgatgagctggcccagtgtcgccgcgctgtggatgcc
ggcacgaggcagtgcgccggtctcttcccggacatggacgcctacgaaggggtgctgctg
caggctagggaggcggcggagacggcggtgcagaaacgccacgccctggaggccctcgcg
tcgtgctaccacgatttcatggtcgtcgcgaaggaggagaagacgtgtgccgtctgcgag
cgtccttttgacagcgacgactcgctggagagctttctgacgcgcaaagccgacaggcag
cgtaccagcccagaggcactagcggctgtgcaggcgaccgtcaccgcagcccaggaggcg
tatcagagtcttgaaaagctgcagagcgtcgtggtgactgtgcggcagaacaggcatcgt
attccggttctagaggtcgaactcaacgcgctggaggacaagatgaagcagagctgcgca
gagcagcgcgaggtctgcgcgacccgcgatgctgcccagcatgtggtgcatcagctggac
acgatgtaccagcatctgtgcatggtgtgtacaatgggagagaagacggtagcactgcgc
gacacgctggcgaggaaggagaaagactttgaggcggcgcaggcagagcagcaacaacaa
gagacacagcgaaaggggggcagcggcgatggtgccacagcgagagctgagccaccacag
cgctcttatgaggagctttgtgaggcctacgcggctgcaacggagcgactgcacaagctc
aacaggcagttcactgaggcccagcggatggagcgcggccaggatgagaatgcggccgaa
cgagagctgcaggagcgcaaggcagcgatgctccaggccgaggtcgcggtggcaaagctg
gaggacttggaggcggctgttcgtgaactgcaggaggaggctgctcagcaccgcacgcgg
gtggaagaactgaagcgccaggcagcagaggcgcagcgctccgtggaggcccatcagcag
cgcgtcctgcaactccgggccgagtttcagaagacggaggcggccgagcgcggcgccttg
gacacagcggagacgcagcttcgcgagctgcagctgtcgctgcctccggtcctccgctac
gtgcagaacggctgcgcccgacagctggaggagctacgggtgcacctgcacgagacggag
agcgcgtacaaagccgcggctcaagaggaggaggggcttgccagtcggatgaaggaagcg
cgggagacgctcagcgaccagcaccgccgctccgcggacatggaccgccacatcgacgtc
ctgcagcaggaggcgtccatcgcggccgacgaggctcacttggcggagacggagcgcacc
ctcgcctccctgaagtcggaccggcttcaggaggtggagcagctgttgggtaaggaggct
agacaggcgagcctggccacactgcgcgagatgatcaccgccaagattacgtcgctggag
aagatacgtgcgcagcaggatggtaacacagaggcgatgctgctcgatgtaaatcaactg
aagcagcagctgcgtggcgacaagtaccagaacatcgagaagcgctaccggtccacgttc
ctgaaggtgcaaacgacggagatatccatccaggacatcgagaagtactacagtgcgctg
gagaaggcggtgcagtcgtaccaccaggagaagattgcacagatcaaccaaatcatcgca
gagctgtggcgccagacgtaccgcggcagcgacgtcgatacggtggagattcgctcagag
acggagggcacgacgacgactgcggcgcggcgcagctacaactaccgcgttgtcatgaag
cggggcaacaacgagatggacatgcgtggtcgctgcagtgctggacagaaggtgctcgcc
tctatcatcattcggctcgcgctgagcgaagccttctgctgcgactgcggcatcctcgcc
cttgatgagccgacaacaaaccttgatgacgacaacgctcgcagtctggcggacgcgctg
cgcaccctcatccaggcgcggagggcggtgaagcactttcaactcgtcgttatcacgcac
gacgagcagtttgtgcgtgcgctaggagggcagtcgctggagaagttctactacgtcctt
aaggatcgagagggcgcattctcggtgattgatgaacgcacctttgaccagctttttgcg
tga
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integrated database retrieval system
