Leishmania mexicana: LMXM_28_2080
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Entry
LMXM_28_2080 CDS
T02288
Name
(RefSeq) putative mitochondrial DEAD box protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_28_2080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmi03041
]
LMXM_28_2080
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_28_2080
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_28_2080
Spliceosome [BR:
lmi03041
]
Complex A
U1 snRNP components
U1 related factors
LMXM_28_2080
Complex B
LMXM_28_2080
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_28_2080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
13450252
NCBI-ProteinID:
XP_003877050
UniProt:
E9B028
LinkDB
All DBs
Position
28:complement(804048..805682)
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AA seq
544 aa
AA seq
DB search
MRRFASGLFGRWGAAQCGVVPFRSHPSLLPLMNRVRCFSMINAAYEGSAPATSSNIGGPH
APPKTNASAVSTKHDVSITDGNGDRVDVTPLNSFEELRDAPRWLAEGLKTLKYPSTTDIQ
KFTIPLLADGHDVIGLAPTGSGKTVAFAVPALAGFKPNPDGTPSVLVLAPTRELVQQTTK
VFQNLGCGQVRVCEAYGGASRDLQARRLRNGCDALVACPGRLKDFLDGGDVSIRNLSFLV
FDEADRLLDMGFQVHLDEIMAYLDSASHPQTMMWSATWPESVQEMARKYLSDDRVLIRAG
TAGAGLQVNEHIKQEVIFCRTFTERIEKLGSLVEDGTIDDDKDKLIIFVERQADTENTAR
AFSHRLGIDARYVGTIHGGLSQRQRDRVMGMFKSNHIRLLVATDVASRGLDIPDVTCVVN
FQAPKTIDSYCHRIGRTGRAGRTGTAYTFLGEEDGGLATELVNYLTRCRVTVPKELMRLA
ENYQHRMPQQRQRFRGVDRGGFSRRENNSGFDRRRSDRGNSREFVPRRPNSRKVDDDLPS
TLDW
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgttttgcaagtgggttgtttggcaggtggggtgccgcacagtgcggggtggtg
ccttttcggagtcacccgagtcttttgcccctgatgaacagggtgcgctgcttctctatg
attaatgctgcttacgagggatcggcccccgcaacgagctcgaatatcggcggcccgcat
gccccaccgaagacaaatgcttctgcagtgtcaacaaagcacgacgtctctatcacggac
ggcaatggtgatcgtgtcgacgtcaccccgctaaactcatttgaagagttgcgcgatgca
ccgcgatggctggcggaggggttgaagacgctcaagtacccttccacgactgacattcag
aagtttacaatacccttactggccgacggccacgatgttatcggacttgcaccgacaggc
tcggggaagacggtggcgttcgcggttccagccctggcggggttcaagcccaaccccgat
gggacgccgtctgttctggttctagctcccacgagggagttggttcagcaaaccaccaag
gtgtttcagaacctcggatgtgggcaggtgcgcgtctgcgaggcctacggtggtgcctcg
cgcgatctacaggcccgccgtcttcgcaacggctgtgacgctctcgttgcctgcccagga
cgactcaaggactttctcgacggcggggacgtgtccatccgtaatctgtcgtttctggtc
tttgacgaagcagatcgccttctcgacatggggttccaggttcacttggatgagattatg
gcctacctcgactcggcctcacatccgcagaccatgatgtggtcggcgacgtggccggag
tcggtgcaagagatggcgcgcaaatatctatccgacgatcgtgttttgattcgagccggt
acagccggcgcggggctgcaagtgaatgagcacattaagcaagaggttatcttttgcaga
accttcacagagcgcattgagaagcttgggtcgttggtcgaggatgggaccatcgacgac
gacaaggacaagctcatcatctttgtggagcgccaggcggatacggaaaacacagccagg
gctttcagccaccgactaggaattgatgcacgctacgtagggacaattcacggcggtctg
tcgcagcggcagcgggacagggtcatggggatgttcaagagtaaccacattcgccttctc
gtcgcgaccgatgttgcttctcgaggtctcgacattcctgatgtgacgtgcgtggtgaac
tttcaggctccaaaaaccattgacagctactgccatcgcatcggtcgcaccggccgcgcc
ggtcgcaccggcacggcttacacattccttggcgaagaggacggtggtctcgcaacagaa
cttgtcaactacttgactcggtgtcgtgtcactgtcccaaaggagttgatgcggctcgcc
gagaactaccagcatcggatgccgcagcagaggcagcgcttcaggggggttgatcgagga
ggtttctccaggagagagaacaacagtgggtttgaccgccgccgcagcgatcgaggcaat
tcacgcgaattcgtgcctcgcaggcccaactcgcgcaaggtcgatgacgatcttccatcc
acgttggactggtga
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