KEGG   Leishmania mexicana: LMXM_28_2570
Entry
LMXM_28_2570      CDS       T02288                                 
Name
(RefSeq) putative splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
lmi  Leishmania mexicana
Pathway
lmi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    LMXM_28_2570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmi03041]
    LMXM_28_2570
   03036 Chromosome and associated proteins [BR:lmi03036]
    LMXM_28_2570
Spliceosome [BR:lmi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    LMXM_28_2570
 Complex B
    LMXM_28_2570
 Complex C
   U2 SnRNP specific factors
    LMXM_28_2570
Chromosome and associated proteins [BR:lmi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LMXM_28_2570
SSDB
Motif
Pfam: TOR1L1_N SF3b1 UME PPP2R1A-like_HEAT HEAT_2 RRP12_HEAT CTD Phage_head_chap TRI4_N DHO_dh
Other DBs
NCBI-GeneID: 13450199
NCBI-ProteinID: XP_003877103
UniProt: E9B081
LinkDB
Position
28:987553..990633
AA seq 1026 aa
MGSSGVTAGGSTPLFASGSTPRMGGVTPMFTGATPAAGATFGATPNYQYEGGTPLQSHFA
SSVETQSITTAAIEAKAKALEKEWNRKNKRLTSEYLNSILPREFFTVAAVPADYNPLPPE
EPNFYEIAVRSMDVFSMQAGAAAAVTAGLDANGQPIRYDIPEDMGDGMPAMKVEDAAVFV
ELLKYHKAEKIPDEHLPSYLLMKNLFKIKNGDTMQRRAGTRYLLDKATIFGSHFIFQRLS
YIWSSDILNIEEKHYFIDFIKSLLQQMGKGARQFTKEVIHLVEPLLTAHERILRDDGKQV
LTLLTRVVGFQAVFAVIREDFGHAESIVRRHTARVMAVVGYAAGTEEVTAALRDMSYAPS
ALARQTVVRSMAELAKMVGHALIAALPEMVAMLERLLRDEKRVQRDAALAVAAIAEATAP
DGIEELAPLVDVICEECMKGIGSMASPFIQAFGALVPLMSPYDAQARTAAMMPNLVNQFS
TPEDEFRRVLISVVRKCVLAEGVTPQFIRQTILEPFFEGFWRVRRLAAERQTSGSLVATT
VEIAKKLGSVDVLVKLSPDMKDESEEYQRMVLTAIKKVVDATGMDAAPDTLVTFVLDGAI
AAVRQDELGTSKLVMNVLATICNALAARLRPYLKQVFDLIKRRRENREASMRAQTADLVS
RIAHTVMLADGTVFLQDLGLSLYERLEDPDARALSANLRAVRSILGELGSRRFKPSVREL
LKRLTFVIKSRNSHVQNGAIALIEDIATNYDADVDAIHLHQLATRGLFELLDSQQRATRH
ACARTFGVIAKKIRPFAIILELVDNFRQDKRQIRICTAVALSAIAKECGPFTIIPYLLNE
YKISEGKQVAVIVQHSVLKAIRYIFEAIGSIGKEYVYPMIPLLERALTETNIQMRRMAVE
ACRAVLLSVAGNDGFEDIALHLLNFVHPNIVELLAKNEVKIGEERLKMVTAVVSYYEAAR
VVIEPGRLLQYLLQGLFHPARKVRDIYRRTYNLIYVGSPERLVPYYPRIQNDASHTYVRH
ELEVLL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgggcagcagtggggtcacagccggtggcagcacgcccctcttcgccagcggcagcacc
ccgcgcatgggcggggttacccctatgttcactggagcgaccccggccgccggggcaacc
ttcggcgccaccccgaactaccagtacgagggcgggacaccgctgcagtcgcacttcgcc
tcctctgtcgagacgcagtccatcacgacggcggccatcgaagccaaggcgaaggcgctg
gagaaggagtggaaccgcaagaacaagcggctcacaagcgagtacctgaacagcatcttg
cccagagagttcttcacggtggcggcggtgccagccgactacaacccgctgccgccggag
gagccgaacttctacgaaatcgccgtgcgctccatggacgtgttttcgatgcaggccggc
gcagcggcggcggtgacggccggcctggacgcgaacgggcagcccatcaggtacgacatc
ccggaggacatgggtgatggtatgcccgccatgaaggtcgaggacgccgccgtgttcgtc
gagctgctcaagtaccacaaggcagagaagatccctgatgagcatctgccttcctacctc
cttatgaagaacctcttcaagatcaagaacggcgacacgatgcagcgccgcgccggcacg
cgctacctcctcgacaaggcaacgatctttggcagccactttatcttccagcgcctcagc
tacatctggagctctgatatcctcaacattgaggagaagcactacttcatcgacttcatc
aagtcgctgctgcagcagatgggcaaaggcgctcggcagttcaccaaggaggtgatccac
ctggtggagccgctgctcacggcgcacgagcgcattcttcgggacgacggcaagcaggtg
ctcaccttgctgacacgggttgtggggtttcaggcagtgttcgcggtgattcgcgaggac
tttggccacgccgagagcattgtgcgtcgccacacggctcgtgtcatggcggtggtcggg
tacgcggccggcaccgaggaggtgacggcggctctgcgtgacatgtcctacgccccgtcg
gcgcttgctcgccagacggtcgtgcgctcgatggcggagctggcgaagatggtggggcac
gcgttgatagcggcgctgccggagatggtggcaatgctggagcgtctgctgcgcgacgag
aagcgcgtgcagcgggacgcggccctggcggtggcggcgattgccgaggcgacggcgccg
gacggcattgaggagctggcgccgctggtcgacgtcatctgcgaggagtgcatgaagggc
atcggcagcatggcgtcgcccttcatccaggccttcggtgccttggttccgcttatgtcc
ccctacgacgcgcaggcccgcacggcggcgatgatgccaaaccttgtcaaccagttcagc
acacctgaggacgagttccgccgcgttctcatatctgtcgtgcgcaagtgcgtgttggcg
gagggtgtgacgccgcagttcattcggcagacaatcctggagccgttctttgagggcttc
tggcgtgtgcgtcgccttgccgcggagcgccaaacgtcagggagtcttgtggcgacgacg
gtggagattgcgaagaagctgggaagtgtggatgtgctcgtgaagttgtcaccagatatg
aaggacgagagcgaggagtaccagcgcatggtgctgacggccatcaagaaggtcgtggac
gccaccgggatggatgcggcccccgacacgctcgtcaccttcgtcctcgacggcgccata
gccgccgtgcgccaggatgagcttgggacgagcaagttggtcatgaacgtgcttgcgact
atctgcaacgcactggcggcgcggctgcggccgtacctgaaacaggtgttcgacctcatc
aagcggcgccgcgagaaccgcgaggcctcgatgcgagcgcagacggccgacctcgtctcg
cgcattgcccacaccgtcatgctggcggacggcaccgtgttcctgcaggacctggggctg
agcctgtacgagcgactcgaggacccggatgcgcgggcgctgagcgcgaacttgcgcgcg
gtacgctccatcttaggcgagctgggctcccgccgcttcaagccctcggtgcgcgagctt
ctgaagcggctcaccttcgtcatcaagagccgcaacagccacgtacagaacggcgccatt
gccctgatcgaggacattgccaccaactacgacgcggatgtcgacgcgattcacctgcac
cagctggcgacccgtgggctcttcgagctgctcgactcccagcagcgggcgacgcgccac
gcgtgcgcgcgcacctttggcgtcatcgccaagaagattcgccccttcgccatcatcctt
gagctggtcgacaactttcgccaggacaagcgccagattcgcatctgcacggccgtggcc
ctgagcgccatcgcgaaggagtgcggccccttcaccatcatcccctacctcctgaacgag
tacaagatcagcgaggggaagcaggtggcggtcattgtgcagcactcggtgctcaaggca
atccggtatattttcgaggccatcggctcgatcggcaaggagtacgtctatcccatgatc
ccgttgctggagcgggccttgacggagacgaacatacagatgcggcgcatggctgtggag
gcttgccgtgccgttctgctctccgtggccggcaacgacggcttcgaggacatcgcgctg
cacttgctgaactttgtccacccgaacattgtggagctgttggcaaagaatgaggtcaag
atcggcgaggagcgcctcaagatggtgacggccgtcgtgagctactacgaggcggcgcgg
gtggtgatcgagccggggaggctgctgcagtacctcttgcagggcctgttccacccagcg
cgcaaggtgcgcgacatctaccgccgcacttataacctcatctacgttggcagcccagag
cgcctcgtcccgtactacccacgcatccagaacgacgcctcgcacacgtacgtccgccat
gagctggaggtgcttctctaa

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