Leishmania mexicana: LMXM_29_0340
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Entry
LMXM_29_0340 CDS
T02288
Name
(RefSeq) putative KU80 protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lmi
Leishmania mexicana
Pathway
lmi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LMXM_29_0340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_29_0340
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
LMXM_29_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
VWA
Motif
Other DBs
NCBI-GeneID:
13451655
NCBI-ProteinID:
XP_003877180
UniProt:
E9B0F8
LinkDB
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Position
29:complement(104688..107084)
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AA seq
798 aa
AA seq
DB search
MPKGATVLVLDITLPSAAALVEACDLCDRILTDKMIYAPSDEVAVILAGTEKSRSALYER
SEQARYKHITVAAELGPATTLTLAPIAATRAGVAVLPEGATVRRSIAEAYDFIDALQVAV
AVLQARTSHKQYNRCIYLFTDARHEVRHKEDLLSLIDALQRDQVALVVIGFDFQPLPAAA
DSQEELNESAVCDASAWAALDRKAQNERILAALCTELGPPSVLVSPAEALESLSLLRCRR
IRQQPVLKVALRIGDVRLATQLFTLTQEERLPSLRRSTQDGVDVVQTIEYVALGGVDEQP
CALAKEERVEAFFLGVDRIPCSETDRETMRVKGPRALEAIGFVGEAEVEPYLLMGGTRAL
LPLAGDHAGQRGFNALVDAMASSRKAMLVRLVRTADAAPSLCVCFARTAASSAEQRHLVL
APLPFADDVRALHFSEYPELQFSAAEEQLMDELIDGLSVDDSVLAPDDTFNPVLQQYYAT
LRAKLSAMNVSAEKGNAKATSSEAAVPQLLPMLRGTSTDFFAEGSEVYEAVSAHRSALAS
CASAFPYEDEVDALLPGSRDAGGKGKPWYQDVMTTSSLVGTQAGSPLSASQGSGGAPSTI
AAAILRGARCSGEADEASAGSHATSDANSISTAPHDTISGGVCFTVTSVDPVGSFSMIVH
HPTVTQAQLNKAKDDLSDVIWELLRSSIKDAIYRKCMACITALRQFCVTQDDAAYYNDFL
LKLEVVARQCGRDADFWVPYVVERKDSANVWPITAQECTSAALPDDTAAKAFLQKDRFDP
AIVFDDTADDDDWLTEIQ
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagggtgccactgtgctggtgctggacatcaccctccccagcgctgcggcgctg
gtggaggcgtgtgacctgtgcgacagaatcctcacggacaagatgatatacgcaccatcg
gatgaagtggctgtcattcttgctggcacagagaagtctcgcagcgctctgtacgagcgg
tctgagcaggcgcggtacaagcacatcaccgtggctgctgagctcggaccggcaacgaca
ctgaccctcgcacccattgctgctactcgcgcaggtgttgctgtgctgcctgaaggcgcg
actgtgcggcggtctatcgcggaggcgtacgacttcattgacgcccttcaggtggcggtg
gcggtgctgcaagcacgcacgagccataagcaatacaaccgctgcatttacctcttcacc
gacgcccgccacgaggtgcggcacaaggaggacctgctctccctcatcgatgccttacag
cgcgaccaggtggcgttggtggtgatcgggttcgattttcagccgctgccagcagccgcg
gattcacaggaggagctcaacgaatccgccgtgtgtgacgctagtgcgtgggctgcgctc
gataggaaggcacaaaacgagagaatactcgcggcgctgtgcaccgagctggggccaccg
agcgtactcgtcagccccgcagaggcgctggagagtctctcgttgctgcgctgtcgaagg
atccgccagcaacccgtgctcaaggttgcgctccgcattggtgacgtgcggcttgccacg
cagctgttcactctcacgcaggaagagcggctgccctcgctgcggcggagcacccaagac
ggcgtagacgtggtgcagaccatcgagtacgtcgccctcggcggcgttgatgagcagccg
tgtgccttggcgaaggaggagcgggtagaggcgtttttcttgggtgtcgaccgcatccca
tgcagcgagaccgatcgagaaacaatgagggtaaagggcccacgcgcgctggaggcgatc
gggttcgttggagaggcagaggtggagccgtacctgttgatgggcggcacacgggcgcta
ctgccactggcgggcgaccatgccggacagcgcggtttcaacgccttggtggacgcgatg
gcgtccagccgtaaggcaatgcttgtgcggctcgtgcgcacggcagatgctgccccgtca
ttgtgcgtgtgctttgcgcggacggcggcgtcatctgcggagcagcgccacttggtgttg
gctcctctccccttcgccgacgacgtgcgagcccttcacttctccgagtacccggagctg
cagtttagtgcggccgaggagcagttgatggacgagctgatcgacggcctctccgtggat
gactcggtgctggcacctgacgataccttcaacccggtcctgcaacagtactacgccacc
ctgcgagccaagctgtccgccatgaatgtctcagcggagaagggcaacgcgaaggcgacc
tcgtctgaagcagcggtaccgcaactgctgcccatgttgaggggcacctccaccgacttc
ttcgcagagggcagcgaggtgtatgaggctgtatcggcgcaccggtccgcccttgcgtct
tgcgcaagcgcgttcccgtacgaagatgaagtggacgcgcttttgccaggaagcagagac
gctggtgggaagggaaagccatggtaccaagatgtgatgacgacctcatcactggtcggc
actcaggccggatcaccgctgtcagcatcacagggatctggtggagccccgtccacgatc
gccgctgccatcctgagaggcgcgaggtgcagcggagaggcggacgaagcgtctgccggc
agccacgccacgtcggatgcgaacagcatctccaccgctccacacgacaccatcagcggc
ggtgtctgcttcacggtcacgtccgtggacccagtcggtagtttctccatgattgtgcac
caccctacagtgacgcaggcacagctgaacaaggcgaaggacgacctcagcgatgtcatc
tgggagctcctgcgcagcagcataaaggacgccatctaccgcaagtgtatggcctgcatt
acggccctccgccagttctgcgtgacgcaggacgacgctgcctactacaacgatttcctg
ctcaaattggaggtggtcgcacggcagtgcgggcgcgacgccgatttctgggtcccgtac
gtggtggagcggaaagacagcgccaacgtgtggcccatcacggcacaggagtgcacgtct
gccgccctgcccgacgataccgccgccaaggctttcctgcagaaggaccgcttcgatccc
gccatcgtcttcgacgacacggctgacgatgatgactggctgacagagattcagtag
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